Regulon of MetJ in Pseudoalteromonas haloplanktis TAC125

Properties
Regulator type:	Transcription factor
TF locus tag:	PSHAa2724
Regulator family:	MetJ
Regulation mode:	repressor
Biological process:	Methionine metabolism; Methionine biosynthesis
Effector:	S-adenosylmethionine
Regulog:	MetJ - Alteromonadales
Statistics of regulated genes:
- Genes	14
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 110 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - MetJ
By TF family - MetJ
By effector - S-adenosylmethionine
By pathway - Methionine metabolism
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -179 Score: 7.2 Sequence: AGATGTTT-(0)-AGACGTCT Position: -124 Score: 5.9 Sequence: AAACACCT-(0)-AGCCATCT Locus tag: PSHAa2724 Name: metJ Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ
	PSHAa2724	metJ	S-adenosylmethionine-responsive transcriptional repressor MetJ
Position: -89 Score: 6.1 Sequence: AGCCTTCT-(0)-AGACGTTG Position: -81 Score: 6.1 Sequence: AGACGTTG-(0)-AAACGTTT Locus tag: PSHAa1181 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	PSHAa1181	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -90 Score: 6.5 Sequence: GGATATTT-(0)-AGACATCT Position: -82 Score: 6.8 Sequence: AGACATCT-(0)-ATCCATCT Locus tag: PSHAa2224 Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46) Locus tag: PSHAa2223 Name: metH2 Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Locus tag: PSHAa2222 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	PSHAa2224	metA	Homoserine O-succinyltransferase (EC 2.3.1.46)
	PSHAa2223	metH2	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	PSHAa2222	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -54 Score: 7.4 Sequence: AGACTTCT-(0)-AAACATCT Locus tag: PSHAa0286 Name: COG0235 Funciton: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Locus tag: PSHAa0287 Name: COG4948 Funciton: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
	PSHAa0286	COG0235	Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
	PSHAa0287	COG4948	L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Position: -156 Score: 6.8 Sequence: AGCCGTCT-(0)-ATACATTT Position: -148 Score: 6 Sequence: ATACATTT-(0)-AAACTTCT Locus tag: PSHAa1226 Name: metT Funciton: Methionine transporter MetT, NhaC antiporter family
	PSHAa1226	metT	Methionine transporter MetT, NhaC antiporter family
Position: -36 Score: 7.9 Sequence: AGACGTCT-(0)-AAACATCT Locus tag: PSHAa2723 Name: metB Funciton: Cystathionine gamma-synthase (EC 2.5.1.48) Locus tag: PSHAa2722 Name: metL Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
	PSHAa2723	metB	Cystathionine gamma-synthase (EC 2.5.1.48)
	PSHAa2722	metL	Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Position: -17 Score: 6.1 Sequence: GGCTATAT-(0)-AGACGTCT Locus tag: PSHAa2276 Name: null Funciton: putative orphan protein Locus tag: PSHAa2275 Name: btuB Funciton: TonB-dependent outer membrane transporter for vitamin B12
	PSHAa2276		putative orphan protein
	PSHAa2275	btuB	TonB-dependent outer membrane transporter for vitamin B12
Position: -68 Score: 6.5 Sequence: AGCTATCT-(0)-AGCCATCT Position: -60 Score: 6.9 Sequence: AGCCATCT-(0)-AAATGGCT Locus tag: PSHAa0642 Name: metF-II Funciton: 5,10-methylenetetrahydrofolate reductase, non-orthologous isozyme (EC 1.5.1.20)
	PSHAa0642	metF-II	5,10-methylenetetrahydrofolate reductase, non-orthologous isozyme (EC 1.5.1.20)
Position: -52 Score: 6.5 Sequence: AGAAGTTT-(0)-AGCCGTCT Locus tag: PSHAa2922 Name: mtnB Funciton: Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)
	PSHAa2922	mtnB	Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of MetJ in Pseudoalteromonas haloplanktis TAC125

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --