Regulon of MetJ in Pseudoalteromonas haloplanktis TAC125
| Regulator type: | Transcription factor |
| TF locus tag: | PSHAa2724 |
| Regulator family: | MetJ |
| Regulation mode: | repressor |
| Biological process: | Methionine metabolism; Methionine biosynthesis |
| Effector: | S-adenosylmethionine |
| Regulog: | MetJ - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - MetJ
- By TF family - MetJ
- By effector - S-adenosylmethionine
- By pathway - Methionine metabolism
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -179
Score: 7.2 Sequence: AGATGTTT-(0)-AGACGTCT
Position: -124
Score: 5.9 Sequence: AAACACCT-(0)-AGCCATCT
Locus tag: PSHAa2724
Name: metJ Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ |
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metJ
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S-adenosylmethionine-responsive transcriptional repressor MetJ
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Position: -89
Score: 6.1 Sequence: AGCCTTCT-(0)-AGACGTTG
Position: -81
Score: 6.1 Sequence: AGACGTTG-(0)-AAACGTTT
Locus tag: PSHAa1181
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Position: -90
Score: 6.5 Sequence: GGATATTT-(0)-AGACATCT
Position: -82
Score: 6.8 Sequence: AGACATCT-(0)-ATCCATCT
Locus tag: PSHAa2224
Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
Locus tag: PSHAa2223
Name: metH2 Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Locus tag: PSHAa2222
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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metA
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Homoserine O-succinyltransferase (EC 2.3.1.46)
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metH2
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Position: -54
Score: 7.4 Sequence: AGACTTCT-(0)-AAACATCT
Locus tag: PSHAa0286
Name: COG0235 Funciton: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Locus tag: PSHAa0287
Name: COG4948 Funciton: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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COG0235
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Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
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COG4948
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L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
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Position: -156
Score: 6.8 Sequence: AGCCGTCT-(0)-ATACATTT
Position: -148
Score: 6 Sequence: ATACATTT-(0)-AAACTTCT
Locus tag: PSHAa1226
Name: metT Funciton: Methionine transporter MetT, NhaC antiporter family |
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metT
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Methionine transporter MetT, NhaC antiporter family
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Position: -36
Score: 7.9 Sequence: AGACGTCT-(0)-AAACATCT
Locus tag: PSHAa2723
Name: metB Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: PSHAa2722
Name: metL Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) |
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metB
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Cystathionine gamma-synthase (EC 2.5.1.48)
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metL
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Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
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Position: -17
Score: 6.1 Sequence: GGCTATAT-(0)-AGACGTCT
Locus tag: PSHAa2276
Name: null Funciton: putative orphan protein
Locus tag: PSHAa2275
Name: btuB Funciton: TonB-dependent outer membrane transporter for vitamin B12 |
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putative orphan protein
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btuB
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TonB-dependent outer membrane transporter for vitamin B12
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Position: -68
Score: 6.5 Sequence: AGCTATCT-(0)-AGCCATCT
Position: -60
Score: 6.9 Sequence: AGCCATCT-(0)-AAATGGCT
Locus tag: PSHAa0642
Name: metF-II Funciton: 5,10-methylenetetrahydrofolate reductase, non-orthologous isozyme (EC 1.5.1.20) |
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metF-II
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5,10-methylenetetrahydrofolate reductase, non-orthologous isozyme (EC 1.5.1.20)
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Position: -52
Score: 6.5 Sequence: AGAAGTTT-(0)-AGCCGTCT
Locus tag: PSHAa2922
Name: mtnB Funciton: Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109) |
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mtnB
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Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |