Regulon of MetR in Pseudoalteromonas haloplanktis TAC125
| Regulator type: | Transcription factor |
| TF locus tag: | PSHAa1181 |
| Regulator family: | LysR |
| Regulation mode: | |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -91
Score: 4.8 Sequence: ATTGAAAAACTTTCATT
Locus tag: PSHAa0642
Name: metF-II Funciton: 5,10-methylenetetrahydrofolate reductase, non-orthologous isozyme (EC 1.5.1.20) |
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metF-II
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5,10-methylenetetrahydrofolate reductase, non-orthologous isozyme (EC 1.5.1.20)
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Position: -17
Score: 4.9 Sequence: CATGAGAATTTTTAAAG
Locus tag: PSHAa1181
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Position: -108
Score: 4.9 Sequence: GATGAAAAAAATTCATT
Locus tag: PSHAa2224
Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
Locus tag: PSHAa2223
Name: metH2 Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Locus tag: PSHAa2222
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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metA
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Homoserine O-succinyltransferase (EC 2.3.1.46)
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metH2
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Position: -120
Score: 4.8 Sequence: TGTGAAATAAATTCAAT
Locus tag: PSHAa2376
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |