Regulon of FabR in Pseudoalteromonas haloplanktis TAC125
| Regulator type: | Transcription factor |
| TF locus tag: | PSHAa2896 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid biosynthesis |
| Effector: | Unsaturated acyl-ACP; Unsaturated acyl-CoA |
| Regulog: | FabR - Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 7 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alteromonadales
- By trascription factor - FabR
- By TF family - TetR
- By effector - Unsaturated acyl-ACP
- By effector - Unsaturated acyl-CoA
- By pathway - Fatty acid biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -31
Score: 6.2 Sequence: AGCTTACAGTTGTACGCT
Locus tag: PSHAa2897
Name: OLE1 Funciton: Fatty acid desaturase (EC 1.14.19.1) |
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OLE1
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Fatty acid desaturase (EC 1.14.19.1)
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Position: -113
Score: 6.2 Sequence: AGCGTACAACTGTAAGCT
Locus tag: PSHAa2896
Name: fabR Funciton: Unsaturated fatty acid biosythesis repressor FabR, TetR family |
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fabR
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Unsaturated fatty acid biosythesis repressor FabR, TetR family
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Position: -54
Score: 6.4 Sequence: AGCGTACAAGTGTACGCT
Locus tag: PSHAa1491
Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
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fabA
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3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
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Position: -92
Score: 5.9 Sequence: AGCGTACACTTGTGCGCT
Locus tag: PSHAa2584
Name: plsC Funciton: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
Locus tag: PSHAa2583
Name: rraB Funciton: Ribonuclease E inhibitor RraB |
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plsC
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1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
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rraB
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Ribonuclease E inhibitor RraB
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Position: -160
Score: 5.9 Sequence: AGCGTACACTTGTGCGCT
Position: -133
Score: 5.3 Sequence: GGCGCACACGTGTAAGCC
Locus tag: PSHAa1268
Name: desC Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Locus tag: PSHAa1269
Name: desB Funciton: Acyl-CoA delta-9-desaturase, DesB |
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desC
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Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
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desB
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Acyl-CoA delta-9-desaturase, DesB
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Position: -47
Score: 5.2 Sequence: AGCGTACACACGTACACT
Locus tag: PSHAb0446
Name: hyIII Funciton: COG1272: Predicted membrane protein hemolysin III homolog |
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hyIII
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COG1272: Predicted membrane protein hemolysin III homolog
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Position: -93
Score: 5.8 Sequence: AGAGTACAAGTGTACGCT
Locus tag: PSHAa2080
Name: fabB Funciton: 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) |
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fabB
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3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |