Profile of regulator FabR in Alteromonadales
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Fatty acid biosynthesis |
| Effector: |
Unsaturated acyl-ACP; Unsaturated acyl-CoA |
| Regulog: |
FabR - Alteromonadales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudoalteromonas atlantica T6c
|
|
Patl_2009 |
fabA |
-54 |
6.1 |
AGCGTACAACTGTTCGCT |
|
Patl_4031 |
fabR |
-137 |
6.3 |
AGCTTACACTTGTACGCT |
|
Patl_4032 |
OLE1 |
-40 |
6.3 |
AGCGTACAAGTGTAAGCT |
|
Patl_3595 |
hyIII |
-62 |
5.6 |
AGTGTACAAGTGTTCGCT |
|
Alteromonas macleodii 'Deep ecotype'
|
|
MADE_01586 |
plsC |
-121 |
5.3 |
ATCGGACAAGTGTACGCT |
|
MADE_02772 |
desC |
-179 |
5.8 |
AGCTTACACTTGTGCGCT |
|
MADE_02772 |
desC |
-156 |
6.3 |
AGCGTACAACTGTACGCT |
|
MADE_03581 |
OLE1 |
-30 |
5.7 |
AGCGAACAGATGTAAGCC |
|
MADE_03143 |
hyIII |
-126 |
5.7 |
AGCGAACAAGTGTGCGCT |
|
Glaciecola sp. HTCC2999
|
|
GHTCC_010100001125 |
plsC |
-141 |
6.3 |
AGCGTACACGTGTTAGCT |
|
GHTCC_010100006274 |
fabA |
-53 |
6.2 |
AGCGTACAAGTGTTCGCT |
|
GHTCC_010100010803 |
fabR |
-62 |
6.3 |
AGCGTACAAGTGTAAGCT |
|
GHTCC_010100010798 |
OLE1 |
-57 |
6.3 |
AGCTTACACTTGTACGCT |
|
Colwellia psychrerythraea 34H
|
|
CPS_3807 |
fabB |
-111 |
5.8 |
AGTGTACAAGTGTACGCT |
|
CPS_3274 |
fabA |
-65 |
5.2 |
AGTGTACAAGCGTACGCT |
|
Alteromonadales bacterium TW-7
|
|
ATW7_11946 |
plsC |
-109 |
6.1 |
AGCGTACAGTTGTTCGCT |
|
ATW7_05551 |
fabB |
-93 |
5.8 |
AGAGTACAAGTGTACGCT |
|
ATW7_02937 |
fadE |
-155 |
6.1 |
AGCGTACAGGTGTAAGCC |
|
ATW7_16882 |
fabR |
-113 |
6.2 |
AGCGTACAACTGTAAGCT |
|
ATW7_16877 |
OLE1 |
-31 |
6.2 |
AGCTTACAGTTGTACGCT |
|
ATW7_12758 |
fabA |
-54 |
6.4 |
AGCGTACAAGTGTACGCT |
|
ATW7_00075 |
hyIII |
-48 |
5.8 |
AGCGTACACTTGTACACT |
|
ATW7_07904 |
desC |
-101 |
5.9 |
AGCGTACACTTGTAGGCT |
|
ATW7_07904 |
desC |
-127 |
5.9 |
AGCGTACACTTGTGCGCT |
|
Pseudoalteromonas haloplanktis TAC125
|
|
PSHAa1268 |
desC |
-133 |
5.3 |
GGCGCACACGTGTAAGCC |
|
PSHAa2584 |
plsC |
-92 |
5.9 |
AGCGTACACTTGTGCGCT |
|
PSHAa1491 |
fabA |
-54 |
6.4 |
AGCGTACAAGTGTACGCT |
|
PSHAa2896 |
fabR |
-113 |
6.2 |
AGCGTACAACTGTAAGCT |
|
PSHAa2897 |
OLE1 |
-31 |
6.2 |
AGCTTACAGTTGTACGCT |
|
PSHAa1268 |
desC |
-160 |
5.9 |
AGCGTACACTTGTGCGCT |
|
PSHAb0446 |
hyIII |
-47 |
5.2 |
AGCGTACACACGTACACT |
|
PSHAa2080 |
fabB |
-93 |
5.8 |
AGAGTACAAGTGTACGCT |
|
Pseudoalteromonas tunicata D2
|
|
PTD2_08769 |
plsC |
-79 |
5.5 |
GGCGTACAGTTGTGCGCT |
|
PTD2_10629 |
desC |
-48 |
5 |
GACGTACACTTGTGCGCT |
|
PTD2_10629 |
desC |
-22 |
6.1 |
AGCTAACACTTGTACGCT |
|
PTD2_19707 |
fabA |
-53 |
6.1 |
AGCGTACATCTGTTCGCT |
|
PTD2_09617 |
fabR |
-129 |
6.3 |
AGCGTACAACTGTACGCT |
|
PTD2_09622 |
OLE1 |
-30 |
6.3 |
AGCGTACAGTTGTACGCT |
|
Idiomarina baltica OS145
|
|
OS145_12684 |
psrA |
-69 |
5.4 |
AGCGAACACTTGATCGCT |
|
OS145_02095 |
fabR |
-104 |
6.1 |
AGCTAACACTTGTACGCT |
|
OS145_02090 |
OLE1 |
-80 |
6.1 |
AGCGTACAAGTGTTAGCT |
|
Idiomarina loihiensis L2TR
|
|
IL1287 |
fabA |
-59 |
6 |
GGCGTACAGTTGTACGCT |
|
IL0918 |
psrA |
-72 |
5.6 |
AGCGAACACTTGCACGCT |
|
IL0277 |
fabR |
-112 |
6.5 |
AGCGTACACCTGTACGCT |
|
IL0278 |
OLE1 |
-59 |
6.5 |
AGCGTACAGGTGTACGCT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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