Regulons of Chromohalobacter salexigens DSM 3043

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BirA	Biotin	Biotin biosynthesis	2	2
TF	Csal_1101		Metabolite transport	2	4
TF	Csal_1739			3	5
TF	Csal_3199		Glycolate utilization; Lactate utilization	3	4
TF	Csal_3216		Sugar utilization	2	4
TF	DgoR	Galactonate	Galactonate utilization	1	1
TF	EutR	Ethanolamine	Ethanolamine utilization	2	2
TF	EutR		Ectoine utilization	2	2
TF	FruR	Fructose-1-phosphate; Fructose-1,6-diphosphate	Fructose utilization	5	5
TF	GntR	Gluconate	Gluconate utilization	3	4
TF	HexR	2-keto-3-deoxy-6-phosphogluconate	Central carbohydrate metabolism	15	8
TF	HpxS		Allantoin utilization	3	7
TF	HypR	Proline; 4-hydroxyproline	Proline and 4-hydrohyproline utilization	3	3
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	5	2
TF	LexA	DNA damage	SOS response	9	4
TF	LldR	L-lactate	Lactate utilization	4	6
TF	MetR	Homocysteine	Methionine biosynthesis	3	4
TF	NorR	Nitric oxide	Nitrosative stress response	2	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	4	6
TF	PdxQ3		Metabolite transport; Pyridoxine/pyridoxal homeostasis	1	1
TF	PdxW2	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	PrpR	2-methylcitrate	Methylcitrate utilization	2	3
TF	PsrA	Oleate	Fatty acid degradation	12	13
TF	RspR	L-gulonate; D-mannonate	L-gulonate utilization	1	1
TF	RutR	Uracil	Pyrimidine utilization	3	2
TF	TauR	Taurine	Taurine utilization	2	2
TF	VanR	Vanillate	Vanillate utilization	2	4
TF	ZntR	Zinc ion, (Zn2+)	Zinc resistance	2	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	7	4
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	4	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --