Regulon of HexR in Chromohalobacter salexigens DSM 3043
| Regulator type: | Transcription factor |
| TF locus tag: | Csal_2742 |
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 2-keto-3-deoxy-6-phosphogluconate |
| Regulog: | HexR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - HexR
- By TF family - RpiR
- By effector - 2-keto-3-deoxy-6-phosphogluconate
- By pathway - Central carbohydrate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -114
Score: 5.3 Sequence: TTGGAAGAATACTACAA
Locus tag: Csal_0936
Name: edd Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: Csal_0935
Name: glk Funciton: Glucokinase (EC 2.7.1.2)
Locus tag: Csal_0934
Name: aldE Funciton: Aldose 1-epimerase
Locus tag: Csal_0933
Name: PF00248 Funciton: Putative aldo/keto reductase |
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edd
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Phosphogluconate dehydratase (EC 4.2.1.12)
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glk
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Glucokinase (EC 2.7.1.2)
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aldE
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Aldose 1-epimerase
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PF00248
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Putative aldo/keto reductase
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Position: -89
Score: 4.6 Sequence: TGGTAGTAAAGTTACAT
Locus tag: Csal_2741
Name: zwf Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: Csal_2740
Name: pgl Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: Csal_2739
Name: eda Funciton: 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
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zwf
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Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
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pgl
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6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
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eda
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4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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Position: -69
Score: 5.3 Sequence: TTGTAGTATTCTTCCAA
Locus tag: Csal_0937
Name: gapA Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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gapA
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NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
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Position: -68
Score: 4.3 Sequence: ATGTAGTAAAATAACCA
Locus tag: Csal_1559
Name: pykA Funciton: Pyruvate kinase (EC 2.7.1.40)
Locus tag: Csal_1558
Name: mgsA Funciton: Methylglyoxal synthase (EC 4.2.3.3) |
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pykA
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Pyruvate kinase (EC 2.7.1.40)
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mgsA
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Methylglyoxal synthase (EC 4.2.3.3)
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Position: -137
Score: 4.7 Sequence: CTGTAAGGAAATTACAG
Locus tag: Csal_0855
Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: Csal_0856
Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
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aceE
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Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
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aceF
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Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
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Position: -222
Score: 5.4 Sequence: TTGTAGTCAAACTACAA
Locus tag: Csal_2449
Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1) |
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aceA
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Isocitrate lyase (EC 4.1.3.1)
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Position: -155
Score: 5.2 Sequence: TTGTAAAAATACTCCAA
Locus tag: Csal_2062
Name: ppsA Funciton: Phosphoenolpyruvate synthase (EC 2.7.9.2) |
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ppsA
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Phosphoenolpyruvate synthase (EC 2.7.9.2)
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Position: -204
Score: 4.6 Sequence: ATGTAACTTTACTACCA
Locus tag: Csal_2742
Name: hexR Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family |
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hexR
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Central carbohydrate metabolism transcription regulator HexR, RpiR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |