Regulons of Rhodospirillum rubrum ATCC 11170

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	2	1
TF	FnrN	Oxygen	Oxidative stress response; Nitrogen fixation	4	2
TF	FruR2	Fructose-1-phosphate	Fructose utilization	2	2
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	26	21
TF	HrcA	Heat shock	Heat shock response	2	1
TF	HutC	cis-Urocanic acid	Histidine utilization	3	4
TF	HypR	Proline; 4-hydroxyproline	Proline and 4-hydrohyproline utilization	1	1
TF	Irr	Heme	Iron homeostasis	4	2
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	IscR2	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	2	1
TF	LexA	DNA damage	SOS response	9	4
TF	LiuR		Branched-chain amino acid degradation	6	6
TF	LldR	L-lactate	Lactate utilization	2	2
TF	NadQ		NAD biosynthesis	1	1
TF	NifA		Nitrogen fixation	9	11
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	5	5
TF	PdxQ	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	PdxQ2		Metabolite transport; Pyridoxine/pyridoxal homeostasis	4	4
TF	PdxR		Pyridoxine/pyridoxal homeostasis	2	2
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	3	3
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	2	1
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	2	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --