Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Rhodospirillum rubrum ATCC 11170

Properties
Regulator type: Transcription factor
TF locus tag: Rru_A3767
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Rhodospirillales
Statistics of regulated genes:
- Genes 46
- Operons 21
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 103 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -75
Score: 5.2
Sequence: AATGCGATTGACTTGCAAA
Locus tag: Rru_A2196
Name: bfd
Funciton: Bacterioferritin-associated ferredoxin
Locus tag: Rru_A2195
Name: bfr
Funciton: Bacterioferritin
Rru_A2196
bfd
Bacterioferritin-associated ferredoxin
Rru_A2195
bfr
Bacterioferritin
Position: -130
Score: 4.2
Sequence: TATGATAATAAGAAGCATT
Locus tag: Rru_A0845
Name: omp11
Funciton: TonB-dependent siderophore receptor
Locus tag: Rru_A0846
Name: ftpB
Funciton: Hypothetical protein FtpB in pyochelin gene cluster
Locus tag: Rru_A0847
Name: null
Funciton: PepSY-associated TM helix domain protein
Rru_A0845
omp11
TonB-dependent siderophore receptor
Rru_A0846
ftpB
Hypothetical protein FtpB in pyochelin gene cluster
Rru_A0847
PepSY-associated TM helix domain protein
Position: -179
Score: 4.6
Sequence: AACGATAATTAATATCATT
Locus tag: Rru_A0841
Name: null
Funciton: Transcriptional Regulator, AraC family
Rru_A0841
Transcriptional Regulator, AraC family
Position: -76
Score: 4.5
Sequence: TCTGCGTTTCATTCTCAAT
Locus tag: Rru_A0769
Name: null
Funciton: Ferric iron ABC transporter, iron-binding protein
Rru_A0769
Ferric iron ABC transporter, iron-binding protein
Position: -98
Score: 5.4
Sequence: ATTGCAAATGACTTGCAAT
Locus tag: Rru_A0879
Name: null
Funciton: Transcriptional regulator, AraC family
Rru_A0879
Transcriptional regulator, AraC family
Position: -118
Score: 4.2
Sequence: AACGATTATCAATAGCATT
Locus tag: Rru_A1054
Name: null
Funciton: Membrane protein involved in colicin uptake
Rru_A1054
Membrane protein involved in colicin uptake
Position: -126
Score: 4.2
Sequence: AATGCTATTGATAATCGTT
Locus tag: Rru_A1053
Name: mcp2
Funciton: Methyl-accepting chemotaxis protein
Rru_A1053
mcp2
Methyl-accepting chemotaxis protein
Position: -58
Score: 4.4
Sequence: AATGCTATTGAATATCGAT
Locus tag: Rru_A2321
Name: mcp
Funciton: Methyl-accepting chemotaxis protein
Rru_A2321
mcp
Methyl-accepting chemotaxis protein
Position: -169
Score: 4.7
Sequence: AACGAGACTTATTAGCAAT
Locus tag: Rru_A0880
Name: omp10
Funciton: TonB-dependent siderophore receptor
Rru_A0880
omp10
TonB-dependent siderophore receptor
Position: -104
Score: 4
Sequence: CATGCGATTGAGACGCGAT
Locus tag: Rru_A0838
Name: omp10
Funciton: TonB-dependent siderophore receptor
Rru_A0838
omp10
TonB-dependent siderophore receptor
Position: -113
Score: 4.5
Sequence: CATGAGACGCATTTTCATT
Locus tag: Rru_A1456
Name: null
Funciton: Transcriptional regulator, AraC family
Rru_A1456
Transcriptional regulator, AraC family
Position: -58
Score: 5.2
Sequence: TTTGCGAATAATTCTCAAA
Locus tag: Rru_A1438
Name: fecI
Funciton: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
Locus tag: Rru_A1439
Name: fecR
Funciton: Fe2+-dicitrate sensor, membrane component
Locus tag: Rru_A1440
Name: omp18
Funciton: TonB-dependent siderophore receptor
Rru_A1438
fecI
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
Rru_A1439
fecR
Fe2+-dicitrate sensor, membrane component
Rru_A1440
omp18
TonB-dependent siderophore receptor
Position: -194
Score: 5.6
Sequence: AATGAAAGTCATTCGCAAT
Locus tag: Rru_A2799
Name: null
Funciton: Cation transport ATPase
Locus tag: Rru_A2798
Name: null
Funciton: ABC-type phosphate transport system, permease component
Locus tag: Rru_A2797
Name: null
Funciton: Hypothetical protein
Locus tag: Rru_A2796
Name: null
Funciton: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72)
Rru_A2799
Cation transport ATPase
Rru_A2798
ABC-type phosphate transport system, permease component
Rru_A2797
Hypothetical protein
Rru_A2796
Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72)
Position: 19
Score: 4.9
Sequence: AATGCGAAGCGTTTGCATT
Locus tag: Rru_A2372
Name: fecI2
Funciton: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
Locus tag: Rru_A2373
Name: fecR2
Funciton: Fe2+-dicitrate sensor, membrane component
Rru_A2372
fecI2
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
Rru_A2373
fecR2
Fe2+-dicitrate sensor, membrane component
Position: -74
Score: 4.7
Sequence: ATTAAGAATGAATTGCATA
Locus tag: Rru_A3164
Name: mntX
Funciton: Predicted manganese transporter
Rru_A3164
mntX
Predicted manganese transporter
Position: -53
Score: 5
Sequence: CATGCGAACAAGTCGCATT
Locus tag: Rru_A2395
Name: omp13
Funciton: TonB-dependent siderophore receptor
Locus tag: Rru_A2394
Name: null
Funciton: PepSY-associated TM helix domain protein
Locus tag: Rru_A2393
Name: null
Funciton: Hypothetical protein
Locus tag: Rru_A2392
Name: null
Funciton: Hypothetical protein
Locus tag: Rru_A2391
Name: null
Funciton: Hypothetical protein
Locus tag: Rru_A2390
Name: null
Funciton: Manganese-binding protein
Locus tag: Rru_A2389
Name: null
Funciton: ABC transporter ATP-binding protein
Locus tag: Rru_A2388
Name: mntB
Funciton: Manganese transport system membrane protein mntB
Locus tag: Rru_A2387
Name: null
Funciton: ABC-type metal ion transport system, periplasmic component/surface adhesin
Rru_A2395
omp13
TonB-dependent siderophore receptor
Rru_A2394
PepSY-associated TM helix domain protein
Rru_A2393
Hypothetical protein
Rru_A2392
Hypothetical protein
Rru_A2391
Hypothetical protein
Rru_A2390
Manganese-binding protein
Rru_A2389
ABC transporter ATP-binding protein
Rru_A2388
mntB
Manganese transport system membrane protein mntB
Rru_A2387
ABC-type metal ion transport system, periplasmic component/surface adhesin
Position: -97
Score: 5.4
Sequence: AATGAGAGTGATTCTCATG
Locus tag: Rru_A2763
Name: null
Funciton: Sensory box/GGDEF family protein
Locus tag: Rru_A2762
Name: Rru_A2762
Funciton: High-affinity Fe2+/Pb2+ permease
Rru_A2763
Sensory box/GGDEF family protein
Rru_A2762
Rru_A2762
High-affinity Fe2+/Pb2+ permease
Position: -61
Score: 3.8
Sequence: AATGAAAATGCATGGCTTT
Locus tag: Rru_A2809
Name: mtr1
Funciton: High-affinity Fe2+/Pb2+ permease
Locus tag: Rru_A2808
Name: COG3470
Funciton: Uncharacterized protein probably involved in high-affinity Fe2+ transport
Rru_A2809
mtr1
High-affinity Fe2+/Pb2+ permease
Rru_A2808
COG3470
Uncharacterized protein probably involved in high-affinity Fe2+ transport
Position: -41
Score: 5.3
Sequence: ATTGATAATTAATCTCATT
Locus tag: Rru_A2597
Name: efeU
Funciton: Ferrous iron transport permease EfeU
Locus tag: Rru_A2598
Name: efeO
Funciton: Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
Locus tag: Rru_A2599
Name: efeB
Funciton: Ferrous iron transport peroxidase EfeB
Locus tag: Rru_A2600
Name: efeO2
Funciton: Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
Rru_A2597
efeU
Ferrous iron transport permease EfeU
Rru_A2598
efeO
Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
Rru_A2599
efeB
Ferrous iron transport peroxidase EfeB
Rru_A2600
efeO2
Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
Position: -197
Score: 4.6
Sequence: ATTAATAGTCAATTGCATT
Locus tag: Rru_A2155
Name: exbB
Funciton: biopolymer transport ExbB protein
Locus tag: Rru_A2154
Name: exbD
Funciton: biopolymer transport ExbD protein
Locus tag: Rru_A2153
Name: tonB
Funciton: Ferric siderophore transport system, periplasmic binding protein TonB
Rru_A2155
exbB
biopolymer transport ExbB protein
Rru_A2154
exbD
biopolymer transport ExbD protein
Rru_A2153
tonB
Ferric siderophore transport system, periplasmic binding protein TonB
Position: -103
Score: 4.9
Sequence: AATGATAGTCGTTCGCAAA
Locus tag: Rru_A2397
Name: fecI3
Funciton: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
Locus tag: Rru_A2396
Name: fecR3
Funciton: Fe2+-dicitrate sensor, membrane component
Rru_A2397
fecI3
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
Rru_A2396
fecR3
Fe2+-dicitrate sensor, membrane component
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