Regulon of PdxR in Rhodospirillum rubrum ATCC 11170
| Regulator type: | Transcription factor |
| TF locus tag: | Rru_A1143 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | |
| Regulog: | PdxR - Rhodospirillales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By pathway - Pyridoxine/pyridoxal homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -115
Score: 13.9 Sequence: AAATGGTCTG-(13)-AAGTGGCTGG-(6)-CAGGCCATTC
Locus tag: Rru_A1144
Name: PF03594 Funciton: Putative pyridoxine transport protein
Locus tag: Rru_A1145
Name: pdxK Funciton: Pyridoxal kinase (EC 2.7.1.35)
Locus tag: Rru_A1146
Name: PF00155 Funciton: Pyridoxal phosphate-dependent transferase
Locus tag: Rru_A1147
Name: PF00202 Funciton: Pyridoxal phosphate-dependent transferase |
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PF03594
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Putative pyridoxine transport protein
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pdxK
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Pyridoxal kinase (EC 2.7.1.35)
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PF00155
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Pyridoxal phosphate-dependent transferase
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PF00202
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Pyridoxal phosphate-dependent transferase
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Position: -151
Score: 12.8 Sequence: AAATGGTCTG-(13)-AAATGGCAGG-(6)-CAGACCATCT
Locus tag: Rru_A1142
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
Locus tag: Rru_A1141
Name: PF01168 Funciton: PLP-binding protein involved in PLP homeostasis |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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PF01168
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PLP-binding protein involved in PLP homeostasis
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |