Regulog SgaR - Enterobacteriales

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Ascorbate utilization
Effector:	Ascorbate-6-phosphate
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 34 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - LacI
By effector - Ascorbate-6-phosphate
By pathway - Ascorbate utilization

Statistics of regulated genes
Genome	Genes	Operons
Citrobacter koseri ATCC BAA-895	6	2
Edwardsiella tarda EIB202	4	2
Enterobacter sp. 638	6	2
Erwinia amylovora ATCC 49946
Erwinia carotovora subsp. atroseptica SCRI1043	5	2
Escherichia coli str. K-12 substr. MG1655
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	4	2
Photorhabdus luminescens subsp. laumondii TTO1	4	2
Proteus mirabilis HI4320	4	2
Salmonella typhimurium LT2	6	2
Serratia proteamaculans 568
Yersinia pestis KIM	2	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
sgaR	* Citrobacter koseri ATCC BAA-895 Site: position = -175 score = 6.11875 sequence = CAAAGATAGCGCTATCAAAA Site: position = -141 score = 6.2292 sequence = ATGTGATAGCGCTATCAAAA Gene: CKO_00488: Ascorbate utilization transcriptional regulator SgaR, LacI family	* Edwardsiella tarda EIB202 Site: position = -242 score = 5.75003 sequence = CAATGGTAGCGCTATCTAGT Site: position = -208 score = 6.10249 sequence = TCGTGATAGCGCTATCATTT Gene: ETAE_3025: Ascorbate utilization transcriptional regulator SgaR, LacI family	* Enterobacter sp. 638 Site: position = -161 score = 5.60848 sequence = CAAAGATAGCGCTACCAATC Site: position = -127 score = 6.2292 sequence = TTGTGATAGCGCTATCAAAT Gene: Ent638_2847: Ascorbate utilization transcriptional regulator SgaR, LacI family	Erwinia amylovora ATCC 49946	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -228 score = 5.33971 sequence = AAAAGGTAGCGCTAACTGAT Gene: ECA3772: Ascorbate utilization transcriptional regulator SgaR, LacI family	Escherichia coli str. K-12 substr. MG1655	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -138 score = 5.43145 sequence = CAAAGTTAGCGCTAACAAAG Gene: KPN_01748: Ascorbate utilization transcriptional regulator SgaR, LacI family	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -177 score = 6.16641 sequence = AAATGATAGCGCTATCTATG Site: position = -143 score = 6.26456 sequence = TTGTGATAGCGCTATCATTT Gene: plu1978: Ascorbate utilization transcriptional regulator SgaR, LacI family	* Proteus mirabilis HI4320 Site: position = -171 score = 5.76389 sequence = TAATGGTAGCGCTATCTAGA Site: position = -137 score = 5.80258 sequence = TTGTGATAGCGCTATTATTT Gene: PMI1778: Ascorbate utilization transcriptional regulator SgaR, LacI family	* Salmonella typhimurium LT2 Site: position = -141 score = 6.2292 sequence = TTGTGATAGCGCTATCAAAT Site: position = -175 score = 5.34693 sequence = CAAAGATAGCGCTACCAGCG Gene: STM2345: Ascorbate utilization transcriptional regulator SgaR, LacI family	Serratia proteamaculans 568	* Yersinia pestis KIM Site: position = -156 score = 6.26456 sequence = TTGTGATAGCGCTATCATTT Site: position = -177 score = 5.88118 sequence = ATCTGGTAGCGCTATCAAAA Site: position = -190 score = 5.85977 sequence = AATTGATAGCGCTATCTGGT Gene: y1619: Ascorbate utilization transcriptional regulator SgaR, LacI family	Ascorbate utilization transcriptional regulator SgaR, LacI family

CRON 2.
sgaA	* Citrobacter koseri ATCC BAA-895 Site: position = -128 score = 6.11875 sequence = TTTTGATAGCGCTATCTTTG Site: position = -162 score = 6.2292 sequence = TTTTGATAGCGCTATCACAT Gene: CKO_00489: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	* Edwardsiella tarda EIB202 Site: position = -122 score = 6.10249 sequence = AAATGATAGCGCTATCACGA Site: position = -88 score = 5.75003 sequence = ACTAGATAGCGCTACCATTG Gene: ETAE_3026: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	* Enterobacter sp. 638 Site: position = -129 score = 6.2292 sequence = ATTTGATAGCGCTATCACAA Site: position = -95 score = 5.60848 sequence = GATTGGTAGCGCTATCTTTG Gene: Ent638_2846: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	Erwinia amylovora ATCC 49946	* Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -91 score = 5.33971 sequence = ATCAGTTAGCGCTACCTTTT Gene: ECA3773: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	Escherichia coli str. K-12 substr. MG1655	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -90 score = 5.43145 sequence = CTTTGTTAGCGCTAACTTTG Gene: KPN_01747: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -115 score = 6.26456 sequence = AAATGATAGCGCTATCACAA Site: position = -81 score = 6.16641 sequence = CATAGATAGCGCTATCATTT Gene: plu1979: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	* Proteus mirabilis HI4320 Site: position = -75 score = 5.76389 sequence = TCTAGATAGCGCTACCATTA Site: position = -109 score = 5.80258 sequence = AAATAATAGCGCTATCACAA Gene: PMI1777: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	* Salmonella typhimurium LT2 Site: position = -131 score = 6.2292 sequence = ATTTGATAGCGCTATCACAA Site: position = -97 score = 5.34693 sequence = CGCTGGTAGCGCTATCTTTG Gene: STM2344: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	Serratia proteamaculans 568	* Yersinia pestis KIM Site: position = -128 score = 6.26456 sequence = AAATGATAGCGCTATCACAA Site: position = -107 score = 5.88118 sequence = TTTTGATAGCGCTACCAGAT Site: position = -94 score = 5.85977 sequence = ACCAGATAGCGCTATCAATT Gene: y1618: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)	Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)
sgaB	Citrobacter koseri ATCC BAA-895 Gene: CKO_00490: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)	Edwardsiella tarda EIB202 Gene: ETAE_3027: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)	Enterobacter sp. 638 Gene: Ent638_2845: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3774: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01746: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu1980: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)	Proteus mirabilis HI4320 Gene: PMI1776: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)	Salmonella typhimurium LT2 Gene: STM2343: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)	Serratia proteamaculans 568	Yersinia pestis KIM	Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)
sgaT	Citrobacter koseri ATCC BAA-895 Gene: CKO_00491: Ascorbate-specific PTS system, EIIC component	Edwardsiella tarda EIB202 Gene: ETAE_3028: Ascorbate-specific PTS system, EIIC component	Enterobacter sp. 638 Gene: Ent638_2844: Ascorbate-specific PTS system, EIIC component	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3775: Ascorbate-specific PTS system, EIIC component	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_01745: Ascorbate-specific PTS system, EIIC component	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu1981: Ascorbate-specific PTS system, EIIC component	Proteus mirabilis HI4320 Gene: PMI1775: Ascorbate-specific PTS system, EIIC component	Salmonella typhimurium LT2 Gene: STM2342: Ascorbate-specific PTS system, EIIC component	Serratia proteamaculans 568	Yersinia pestis KIM Gene: y1615: Ascorbate-specific PTS system, EIIC component	Ascorbate-specific PTS system, EIIC component
tktA	Citrobacter koseri ATCC BAA-895 Gene: CKO_00492: Transketolase, N-terminal section (EC 2.2.1.1)	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_2843: Transketolase, N-terminal section (EC 2.2.1.1)	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2341: Transketolase, N-terminal section (EC 2.2.1.1)	Serratia proteamaculans 568	Yersinia pestis KIM	Transketolase, N-terminal section (EC 2.2.1.1)
tktB	Citrobacter koseri ATCC BAA-895 Gene: CKO_00493: Transketolase, C-terminal section (EC 2.2.1.1)	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_2842: Transketolase, C-terminal section (EC 2.2.1.1)	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2340: Transketolase, C-terminal section (EC 2.2.1.1)	Serratia proteamaculans 568	Yersinia pestis KIM	Transketolase, C-terminal section (EC 2.2.1.1)
tal	Citrobacter koseri ATCC BAA-895 Gene: CKO_02285: Transaldolase (EC 2.2.1.2)	Edwardsiella tarda EIB202 Gene: ETAE_0452: Transaldolase (EC 2.2.1.2)	Enterobacter sp. 638 Gene: Ent638_1319: Transaldolase (EC 2.2.1.2)	Erwinia amylovora ATCC 49946	Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA3776: Transaldolase (EC 2.2.1.2)	Escherichia coli str. K-12 substr. MG1655 Gene: b0825: Transaldolase (EC 2.2.1.2)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568 Gene: Spro_2640: Transaldolase (EC 2.2.1.2)	Yersinia pestis KIM Gene: y2074: Transaldolase (EC 2.2.1.2)	Transaldolase (EC 2.2.1.2)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog SgaR - Enterobacteriales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --