Regulog SgaR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Ascorbate utilization |
| Effector: | Ascorbate-6-phosphate |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - LacI
- By effector - Ascorbate-6-phosphate
- By pathway - Ascorbate utilization
| Genome | Genes | Operons |
|---|---|---|
| Citrobacter koseri ATCC BAA-895 | 6 | 2 |
| Edwardsiella tarda EIB202 | 4 | 2 |
| Enterobacter sp. 638 | 6 | 2 |
| Erwinia amylovora ATCC 49946 | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | 5 | 2 |
| Escherichia coli str. K-12 substr. MG1655 | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 4 | 2 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 4 | 2 |
| Proteus mirabilis HI4320 | 4 | 2 |
| Salmonella typhimurium LT2 | 6 | 2 |
| Serratia proteamaculans 568 | ||
| Yersinia pestis KIM | 2 | 2 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| sgaR |
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Citrobacter koseri ATCC BAA-895 Site: position = -175 score = 6.11875 sequence = CAAAGATAGCGCTATCAAAA Site: position = -141 score = 6.2292 sequence = ATGTGATAGCGCTATCAAAA Gene: CKO_00488: Ascorbate utilization transcriptional regulator SgaR, LacI family |
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Edwardsiella tarda EIB202 Site: position = -242 score = 5.75003 sequence = CAATGGTAGCGCTATCTAGT Site: position = -208 score = 6.10249 sequence = TCGTGATAGCGCTATCATTT Gene: ETAE_3025: Ascorbate utilization transcriptional regulator SgaR, LacI family |
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Enterobacter sp. 638 Site: position = -161 score = 5.60848 sequence = CAAAGATAGCGCTACCAATC Site: position = -127 score = 6.2292 sequence = TTGTGATAGCGCTATCAAAT Gene: Ent638_2847: Ascorbate utilization transcriptional regulator SgaR, LacI family |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -228 score = 5.33971 sequence = AAAAGGTAGCGCTAACTGAT Gene: ECA3772: Ascorbate utilization transcriptional regulator SgaR, LacI family |
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Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -138 score = 5.43145 sequence = CAAAGTTAGCGCTAACAAAG Gene: KPN_01748: Ascorbate utilization transcriptional regulator SgaR, LacI family |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -177 score = 6.16641 sequence = AAATGATAGCGCTATCTATG Site: position = -143 score = 6.26456 sequence = TTGTGATAGCGCTATCATTT Gene: plu1978: Ascorbate utilization transcriptional regulator SgaR, LacI family |
*
Proteus mirabilis HI4320 Site: position = -171 score = 5.76389 sequence = TAATGGTAGCGCTATCTAGA Site: position = -137 score = 5.80258 sequence = TTGTGATAGCGCTATTATTT Gene: PMI1778: Ascorbate utilization transcriptional regulator SgaR, LacI family |
*
Salmonella typhimurium LT2 Site: position = -141 score = 6.2292 sequence = TTGTGATAGCGCTATCAAAT Site: position = -175 score = 5.34693 sequence = CAAAGATAGCGCTACCAGCG Gene: STM2345: Ascorbate utilization transcriptional regulator SgaR, LacI family |
|
*
Yersinia pestis KIM Site: position = -156 score = 6.26456 sequence = TTGTGATAGCGCTATCATTT Site: position = -177 score = 5.88118 sequence = ATCTGGTAGCGCTATCAAAA Site: position = -190 score = 5.85977 sequence = AATTGATAGCGCTATCTGGT Gene: y1619: Ascorbate utilization transcriptional regulator SgaR, LacI family |
Ascorbate utilization transcriptional regulator SgaR, LacI family |
| CRON 2. | |||||||||||||
| sgaA |
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Citrobacter koseri ATCC BAA-895 Site: position = -128 score = 6.11875 sequence = TTTTGATAGCGCTATCTTTG Site: position = -162 score = 6.2292 sequence = TTTTGATAGCGCTATCACAT Gene: CKO_00489: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
*
Edwardsiella tarda EIB202 Site: position = -122 score = 6.10249 sequence = AAATGATAGCGCTATCACGA Site: position = -88 score = 5.75003 sequence = ACTAGATAGCGCTACCATTG Gene: ETAE_3026: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
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Enterobacter sp. 638 Site: position = -129 score = 6.2292 sequence = ATTTGATAGCGCTATCACAA Site: position = -95 score = 5.60848 sequence = GATTGGTAGCGCTATCTTTG Gene: Ent638_2846: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
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Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -91 score = 5.33971 sequence = ATCAGTTAGCGCTACCTTTT Gene: ECA3773: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
|
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Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -90 score = 5.43145 sequence = CTTTGTTAGCGCTAACTTTG Gene: KPN_01747: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -115 score = 6.26456 sequence = AAATGATAGCGCTATCACAA Site: position = -81 score = 6.16641 sequence = CATAGATAGCGCTATCATTT Gene: plu1979: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
*
Proteus mirabilis HI4320 Site: position = -75 score = 5.76389 sequence = TCTAGATAGCGCTACCATTA Site: position = -109 score = 5.80258 sequence = AAATAATAGCGCTATCACAA Gene: PMI1777: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
*
Salmonella typhimurium LT2 Site: position = -131 score = 6.2292 sequence = ATTTGATAGCGCTATCACAA Site: position = -97 score = 5.34693 sequence = CGCTGGTAGCGCTATCTTTG Gene: STM2344: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
|
*
Yersinia pestis KIM Site: position = -128 score = 6.26456 sequence = AAATGATAGCGCTATCACAA Site: position = -107 score = 5.88118 sequence = TTTTGATAGCGCTACCAGAT Site: position = -94 score = 5.85977 sequence = ACCAGATAGCGCTATCAATT Gene: y1618: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) |
| sgaB |
Gene: CKO_00490: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
Gene: ETAE_3027: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
Gene: Ent638_2845: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
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Gene: ECA3774: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
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Gene: KPN_01746: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
Gene: plu1980: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
Gene: PMI1776: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
Gene: STM2343: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
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Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) |
| sgaT |
Gene: CKO_00491: Ascorbate-specific PTS system, EIIC component |
Gene: ETAE_3028: Ascorbate-specific PTS system, EIIC component |
Gene: Ent638_2844: Ascorbate-specific PTS system, EIIC component |
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Gene: ECA3775: Ascorbate-specific PTS system, EIIC component |
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Gene: KPN_01745: Ascorbate-specific PTS system, EIIC component |
Gene: plu1981: Ascorbate-specific PTS system, EIIC component |
Gene: PMI1775: Ascorbate-specific PTS system, EIIC component |
Gene: STM2342: Ascorbate-specific PTS system, EIIC component |
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Gene: y1615: Ascorbate-specific PTS system, EIIC component |
Ascorbate-specific PTS system, EIIC component |
| tktA |
Gene: CKO_00492: Transketolase, N-terminal section (EC 2.2.1.1) |
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Gene: Ent638_2843: Transketolase, N-terminal section (EC 2.2.1.1) |
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Gene: STM2341: Transketolase, N-terminal section (EC 2.2.1.1) |
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Transketolase, N-terminal section (EC 2.2.1.1) |
| tktB |
Gene: CKO_00493: Transketolase, C-terminal section (EC 2.2.1.1) |
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Gene: Ent638_2842: Transketolase, C-terminal section (EC 2.2.1.1) |
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Gene: STM2340: Transketolase, C-terminal section (EC 2.2.1.1) |
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Transketolase, C-terminal section (EC 2.2.1.1) |
| tal |
Gene: CKO_02285: Transaldolase (EC 2.2.1.2) |
Gene: ETAE_0452: Transaldolase (EC 2.2.1.2) |
Gene: Ent638_1319: Transaldolase (EC 2.2.1.2) |
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Gene: ECA3776: Transaldolase (EC 2.2.1.2) |
Gene: b0825: Transaldolase (EC 2.2.1.2) |
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Gene: Spro_2640: Transaldolase (EC 2.2.1.2) |
Gene: y2074: Transaldolase (EC 2.2.1.2) |
Transaldolase (EC 2.2.1.2) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |