Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog RhaS - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Proteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 31 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Citrobacter koseri ATCC BAA-895 5 4
Edwardsiella tarda EIB202
Enterobacter sp. 638 14 4
Erwinia amylovora ATCC 49946
Erwinia carotovora subsp. atroseptica SCRI1043 13 7
Escherichia coli str. K-12 substr. MG1655 7 3
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 14 4
Photorhabdus luminescens subsp. laumondii TTO1
Proteus mirabilis HI4320
Salmonella typhimurium LT2 12 5
Serratia proteamaculans 568
Yersinia pestis KIM 3 3
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rhaB
*
Citrobacter koseri ATCC BAA-895

Site:
position = -160
score = 10.6665
sequence = ACCTTTGCCTCCTTGCCA-(15)-TGTCAGTAACAGGAAGGT

Gene: CKO_03100: Rhamnulokinase (EC 2.7.1.5)
 
Edwardsiella tarda EIB202
*
Enterobacter sp. 638

Site:
position = -107
score = 10.1038
sequence = ATCTTTGATTCCTTGCCA-(15)-TGTCAGTGGCGAGAAGGT

Gene: Ent638_4067: Rhamnulokinase (EC 2.7.1.5)
 
Erwinia amylovora ATCC 49946
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -105
score = 9.69397
sequence = AGCTTTGTCATTTTGCCA-(15)-TGGCACTCATTGGAAGGT

Gene: ECA0440: Rhamnulokinase (EC 2.7.1.5)
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -105
score = 11.0876
sequence = ATCTTTCCCTGGTTGCCA-(14)-TGTCAGTAACGAGAAGGT

Gene: b3904: Rhamnulokinase (EC 2.7.1.5)
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -106
score = 10.516
sequence = ACCTTTGCTTTCTTGCCA-(15)-TGTCCGTAACGAGAAGGT

Gene: KPN_04213: Rhamnulokinase (EC 2.7.1.5)
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
*
Salmonella typhimurium LT2

Site:
position = -105
score = 11.341
sequence = ATCTTTGCCTTGTTGCCA-(14)-TGTCAGTAACGAGAAGGT

Gene: STM4047: Rhamnulokinase (EC 2.7.1.5)
 
Serratia proteamaculans 568
*
Yersinia pestis KIM

Site:
position = -212
score = 10.1077
sequence = ACTTTCGTCATTCTGCCA-(15)-TGGCAGTGATGAGAAGGT

Gene: y0587: Rhamnulokinase (EC 2.7.1.5)
Rhamnulokinase (EC 2.7.1.5)
rhaA
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03102: L-rhamnose isomerase (EC 5.3.1.14)
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_4068: L-rhamnose isomerase (EC 5.3.1.14)
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0439: L-rhamnose isomerase (EC 5.3.1.14)
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3903: L-rhamnose isomerase (EC 5.3.1.14)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04212: L-rhamnose isomerase (EC 5.3.1.14)
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2

Gene: STM4046: L-rhamnose isomerase (EC 5.3.1.14)
 
Serratia proteamaculans 568
 
Yersinia pestis KIM

Gene: y0586: L-rhamnose isomerase (EC 5.3.1.14)
L-rhamnose isomerase (EC 5.3.1.14)
rhaD
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03103: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_4069: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0438: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3902: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04211: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2

Gene: STM4045: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
 
Serratia proteamaculans 568
 
Yersinia pestis KIM

Gene: y0585: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
rhaF
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_4070: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04210: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
rhaG
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_4071: L-rhamnose ABC transporter, duplicated ATP-binding component
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04209: L-rhamnose ABC transporter, duplicated ATP-binding component
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
L-rhamnose ABC transporter, duplicated ATP-binding component
rhaH
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_4072: L-rhamnose ABC transporter, permease component 1
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04208: L-rhamnose ABC transporter, permease component 1
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
L-rhamnose ABC transporter, permease component 1
rhaJ
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_4073: L-rhamnose ABC transporter, permease component 2
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04207: L-rhamnose ABC transporter, permease component 2
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
L-rhamnose ABC transporter, permease component 2
rhaZ
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03104: L-lactaldehyde reductase
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_4074: L-lactaldehyde reductase
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04206: L-lactaldehyde reductase
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2

Gene: STM4044: L-lactaldehyde reductase
 
Serratia proteamaculans 568
 
Yersinia pestis KIM

Gene: y0584: L-lactaldehyde reductase
L-lactaldehyde reductase
rhaM
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03106: L-rhamnose mutarotase
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_4075: L-rhamnose mutarotase
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0437: L-rhamnose mutarotase
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3901: L-rhamnose mutarotase
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04205: L-rhamnose mutarotase
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2

Gene: STM4043: L-rhamnose mutarotase
 
Serratia proteamaculans 568
 
Yersinia pestis KIM

Gene: y0583: L-rhamnose mutarotase
L-rhamnose mutarotase
 
CRON 2.
rhiE
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -294
score = 9.89087
sequence = TTCTTCCCGCTAGTGCCA-(15)-TGGCAGTAGCGGGAAGGA

Gene: ECA0804: Rhamnogalacturonate lyase precursor (EC 4.2.2.-)
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
Rhamnogalacturonate lyase precursor (EC 4.2.2.-)
 
CRON 3.
rhaS
*
Citrobacter koseri ATCC BAA-895

Site:
position = -245
score = 10.4971
sequence = ACCTTCCTGTTACTGACA-(15)-TGGCAAGGAGGCAAAGGT

Gene: CKO_03099: L-rhamnose operon transcriptional activator RhaS, AraC family
 
Edwardsiella tarda EIB202
*
Enterobacter sp. 638

Site:
position = -245
score = 9.141
sequence = ACCTTCTCGCCACTGACA-(15)-TGGCAAGGAATCAAAGAT

Gene: Ent638_4066: L-rhamnose operon transcriptional activator RhaS, AraC family
 
Erwinia amylovora ATCC 49946
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -262
score = 9.77112
sequence = ACCTTCCAATGAGTGCCA-(15)-TGGCAAAATGACAAAGCT

Gene: ECA0441: L-rhamnose operon transcriptional activator RhaS, AraC family
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -232
score = 10.2662
sequence = ACCTTCTCGTTACTGACA-(14)-TGGCAACCAGGGAAAGAT

Gene: b3905: L-rhamnose operon transcriptional activator RhaS, AraC family
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -255
score = 10.0585
sequence = ACCTTCTCGTTACGGACA-(15)-TGGCAAGAAAGCAAAGGT

Gene: KPN_04214: L-rhamnose operon transcriptional activator RhaS, AraC family
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
*
Salmonella typhimurium LT2

Site:
position = -232
score = 10.5344
sequence = ACCTTCTCGTTACTGACA-(14)-TGGCAACAAGGCAAAGAT

Gene: STM4048: L-rhamnose operon transcriptional activator RhaS, AraC family
 
Serratia proteamaculans 568
*
Yersinia pestis KIM

Site:
position = -265
score = 10.1587
sequence = ACCTTCTCATCACTGCCA-(15)-TGGCAGAATGACGAAAGT

Gene: y0590: L-rhamnose operon transcriptional activator RhaS, AraC family
L-rhamnose operon transcriptional activator RhaS, AraC family
rhaR
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03095: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_4065: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0442: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Escherichia coli str. K-12 substr. MG1655

Gene: b3906: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_04215: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2

Gene: STM4049: L-rhamnose operon transcriptional activator RhaR, AraC family
 
Serratia proteamaculans 568
 
Yersinia pestis KIM

Gene: y0591: L-rhamnose operon transcriptional activator RhaR, AraC family
L-rhamnose operon transcriptional activator RhaR, AraC family
 
CRON 4.
aldA
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_01448: Aldehyde dehydrogenase A (EC 1.2.1.22)
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_1953: Aldehyde dehydrogenase A (EC 1.2.1.22)
 
Erwinia amylovora ATCC 49946
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -279
score = 10.1352
sequence = ATCATGACTTTTTTGCCA-(15)-TGGCAGCTATGAAAAGGT

Gene: ECA0118: Aldehyde dehydrogenase A (EC 1.2.1.22)
 
Escherichia coli str. K-12 substr. MG1655

Gene: b1415: Aldehyde dehydrogenase A (EC 1.2.1.22)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_01501: Aldehyde dehydrogenase A (EC 1.2.1.22)
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
Aldehyde dehydrogenase A (EC 1.2.1.22)
 
CRON 5.
rhiA
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
*
Salmonella typhimurium LT2

Site:
position = -106
score = 10.6943
sequence = ATCTTTCTTTTGGTGCCA-(14)-TGGCAAAATCAAGAAGGT

Gene: STM4054: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit
rhiB
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2

Gene: STM4053: predicted rhamnogalacturonide TRAP transporter, small transmembrane subunit
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
predicted rhamnogalacturonide TRAP transporter, small transmembrane subunit
rhiC
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2

Gene: STM4052: predicted rhamnogalacturonide TRAP transporter, large transmembrane subunit
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
predicted rhamnogalacturonide TRAP transporter, large transmembrane subunit
 
CRON 6.
ECA2209
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -238
score = 10.7309
sequence = ATCTTTATCCTACTGCCA-(15)-TGGCAATAATGTGAAGGT

Gene: ECA2209: putative oxidoreductase
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
putative oxidoreductase
ECA2210
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA2210: periplasmic binding protein precursor
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
periplasmic binding protein precursor
 
CRON 7.
rhiN2
 
Citrobacter koseri ATCC BAA-895
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
*
Salmonella typhimurium LT2

Site:
position = -146
score = 11.0641
sequence = CTCTTTGCGTTTTTGCCA-(15)-TGGCAGAAACAAAAAGGT

Gene: STM1911: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
CRON 8.
rhiT
*
Citrobacter koseri ATCC BAA-895

Site:
position = -147
score = 11.0032
sequence = CTCTTTGTATTTTTGCCA-(15)-TGGCAAAAATGAAAAGGT

Gene: CKO_01081: Rhamnogalacturonide transporter
 
Edwardsiella tarda EIB202
*
Enterobacter sp. 638

Site:
position = -146
score = 11.0743
sequence = CTCTTTGCATTATTGCCA-(15)-TGGCAGAAACAGAAAGGT

Gene: Ent638_2444: Rhamnogalacturonide transporter
 
Erwinia amylovora ATCC 49946
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -123
score = 10.5761
sequence = ATCTTCCCTGTGCTGCCA-(15)-TGGCAAAAGCGCAAAGGT

Gene: ECA3560: Rhamnogalacturonide transporter
 
Escherichia coli str. K-12 substr. MG1655
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -157
score = 10.3497
sequence = CTCTTTGTCATTTTGCCA-(15)-TGGCAAAAGTACAAAGGT

Gene: KPN_02390: Rhamnogalacturonide transporter
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
Rhamnogalacturonide transporter
rhiN
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_01082: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Edwardsiella tarda EIB202
 
Enterobacter sp. 638

Gene: Ent638_2443: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Erwinia amylovora ATCC 49946
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA3559: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Escherichia coli str. K-12 substr. MG1655
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_02389: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
 
Salmonella typhimurium LT2
 
Serratia proteamaculans 568
 
Yersinia pestis KIM
Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
 
CRON 9.
rhaT
*
Citrobacter koseri ATCC BAA-895

Site:
position = -126
score = 8.47014
sequence = ATAACGTGCTGGTTGCCA-(15)-CGGCAATCCTCAAAAGGT

Gene: CKO_03094: L-rhamnose:proton symporter
 
Edwardsiella tarda EIB202
*
Enterobacter sp. 638

Site:
position = -127
score = 8.31058
sequence = TTAACGCGTTGATTGCCA-(15)-CGGCAACCTTCTGAAGGT

Gene: Ent638_4064: L-rhamnose:proton symporter
 
Erwinia amylovora ATCC 49946
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -171
score = 8.41524
sequence = ACCTTCAAACCGATGCCG-(15)-TGGCACGCATCTGAAGGT

Gene: ECA0450: L-rhamnose:proton symporter
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -123
score = 9.28177
sequence = TTAATGCCGTGATTGCCA-(15)-CGGCAACAGGCGAAAGGT

Gene: b3907: L-rhamnose:proton symporter
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -127
score = 8.57021
sequence = TTAAGCCCATGGTTGCCA-(15)-TGGCAACGTCCTGAAGGC

Gene: KPN_04216: L-rhamnose:proton symporter
 
Photorhabdus luminescens subsp. laumondii TTO1
 
Proteus mirabilis HI4320
*
Salmonella typhimurium LT2

Site:
position = -271
score = 9.68126
sequence = TTCTTTGCATTGTTGCCA-(14)-TGTCGTTATGATGAAGGT

Site:
position = -127
score = 7.77014
sequence = TTAACGTGCTGATTGCCA-(15)-CGGCAATCGTTATAAGGT

Gene: STM4050: L-rhamnose:proton symporter
 
Serratia proteamaculans 568
*
Yersinia pestis KIM

Site:
position = -149
score = 9.30914
sequence = ACCTACTGAATTTTGCCA-(15)-AGGCAGTCAGCCGAAGGT

Gene: y0593: L-rhamnose:proton symporter
L-rhamnose:proton symporter
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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