Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator RhaS in Enterobacteriales

Properties
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Regulog: RhaS - Enterobacteriales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Citrobacter koseri ATCC BAA-895
CKO_01081 rhiT -147 11 CTCTTTGTATTTTTGCCA-(15)-TGGCAAAAATGAAAAGGT
CKO_03100 rhaB -160 10.7 ACCTTTGCCTCCTTGCCA-(15)-TGTCAGTAACAGGAAGGT
CKO_03094 rhaT -126 8.5 ATAACGTGCTGGTTGCCA-(15)-CGGCAATCCTCAAAAGGT
CKO_03099 rhaS -245 10.5 ACCTTCCTGTTACTGACA-(15)-TGGCAAGGAGGCAAAGGT
Enterobacter sp. 638
Ent638_4064 rhaT -127 8.3 TTAACGCGTTGATTGCCA-(15)-CGGCAACCTTCTGAAGGT
Ent638_4067 rhaB -107 10.1 ATCTTTGATTCCTTGCCA-(15)-TGTCAGTGGCGAGAAGGT
Ent638_4066 rhaS -245 9.1 ACCTTCTCGCCACTGACA-(15)-TGGCAAGGAATCAAAGAT
Ent638_2444 rhiT -146 11.1 CTCTTTGCATTATTGCCA-(15)-TGGCAGAAACAGAAAGGT
Erwinia carotovora subsp. atroseptica SCRI1043
ECA0804 rhiE -294 9.9 TTCTTCCCGCTAGTGCCA-(15)-TGGCAGTAGCGGGAAGGA
ECA0450 rhaT -171 8.4 ACCTTCAAACCGATGCCG-(15)-TGGCACGCATCTGAAGGT
ECA0441 rhaS -262 9.8 ACCTTCCAATGAGTGCCA-(15)-TGGCAAAATGACAAAGCT
ECA3560 rhiT -123 10.6 ATCTTCCCTGTGCTGCCA-(15)-TGGCAAAAGCGCAAAGGT
ECA2209 null -238 10.7 ATCTTTATCCTACTGCCA-(15)-TGGCAATAATGTGAAGGT
ECA0118 aldA -279 10.1 ATCATGACTTTTTTGCCA-(15)-TGGCAGCTATGAAAAGGT
ECA0440 rhaB -105 9.7 AGCTTTGTCATTTTGCCA-(15)-TGGCACTCATTGGAAGGT
Escherichia coli str. K-12 substr. MG1655
b3904 rhaB -105 11.1 ATCTTTCCCTGGTTGCCA-(14)-TGTCAGTAACGAGAAGGT
b3907 rhaT -123 9.3 TTAATGCCGTGATTGCCA-(15)-CGGCAACAGGCGAAAGGT
b3905 rhaS -232 10.3 ACCTTCTCGTTACTGACA-(14)-TGGCAACCAGGGAAAGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
KPN_04216 rhaT -127 8.6 TTAAGCCCATGGTTGCCA-(15)-TGGCAACGTCCTGAAGGC
KPN_04213 rhaB -106 10.5 ACCTTTGCTTTCTTGCCA-(15)-TGTCCGTAACGAGAAGGT
KPN_04214 rhaS -255 10.1 ACCTTCTCGTTACGGACA-(15)-TGGCAAGAAAGCAAAGGT
KPN_02390 rhiT -157 10.3 CTCTTTGTCATTTTGCCA-(15)-TGGCAAAAGTACAAAGGT
Salmonella typhimurium LT2
STM1911 rhiN2 -146 11.1 CTCTTTGCGTTTTTGCCA-(15)-TGGCAGAAACAAAAAGGT
STM4050 rhaT -271 9.7 TTCTTTGCATTGTTGCCA-(14)-TGTCGTTATGATGAAGGT
STM4050 rhaT -127 7.8 TTAACGTGCTGATTGCCA-(15)-CGGCAATCGTTATAAGGT
STM4054 rhiA -106 10.7 ATCTTTCTTTTGGTGCCA-(14)-TGGCAAAATCAAGAAGGT
STM4048 rhaS -232 10.5 ACCTTCTCGTTACTGACA-(14)-TGGCAACAAGGCAAAGAT
STM4047 rhaB -105 11.3 ATCTTTGCCTTGTTGCCA-(14)-TGTCAGTAACGAGAAGGT
Yersinia pestis KIM
y0593 rhaT -149 9.3 ACCTACTGAATTTTGCCA-(15)-AGGCAGTCAGCCGAAGGT
y0590 rhaS -265 10.2 ACCTTCTCATCACTGCCA-(15)-TGGCAGAATGACGAAAGT
y0587 rhaB -212 10.1 ACTTTCGTCATTCTGCCA-(15)-TGGCAGTGATGAGAAGGT
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