Regulon of RhaS in Escherichia coli str. K-12 substr. MG1655

Properties
Regulator type:	Transcription factor
TF locus tag:	b3905
Regulator family:	AraC
Regulation mode:	activator
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Regulog:	RhaS - Enterobacteriales
Statistics of regulated genes:
- Genes	7
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 31 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - AraC
By effector - Rhamnose
By pathway - Rhamnose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -105 Score: 11.1 Sequence: ATCTTTCCCTGGTTGCCA-(14)-TGTCAGTAACGAGAAGGT Locus tag: b3904 Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) Locus tag: b3903 Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14) Locus tag: b3902 Name: rhaD Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) Locus tag: b3901 Name: rhaM Funciton: L-rhamnose mutarotase
	b3904	rhaB	Rhamnulokinase (EC 2.7.1.5)
	b3903	rhaA	L-rhamnose isomerase (EC 5.3.1.14)
	b3902	rhaD	Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
	b3901	rhaM	L-rhamnose mutarotase
Position: -232 Score: 10.3 Sequence: ACCTTCTCGTTACTGACA-(14)-TGGCAACCAGGGAAAGAT Locus tag: b3905 Name: rhaS Funciton: L-rhamnose operon transcriptional activator RhaS, AraC family Locus tag: b3906 Name: rhaR Funciton: L-rhamnose operon transcriptional activator RhaR, AraC family
	b3905	rhaS	L-rhamnose operon transcriptional activator RhaS, AraC family
	b3906	rhaR	L-rhamnose operon transcriptional activator RhaR, AraC family
Position: -123 Score: 9.3 Sequence: TTAATGCCGTGATTGCCA-(15)-CGGCAACAGGCGAAAGGT Locus tag: b3907 Name: rhaT Funciton: L-rhamnose:proton symporter
	b3907	rhaT	L-rhamnose:proton symporter

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