Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhaM gene

Properties
Regulog: RhaS - Enterobacteriales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Proteobacteria
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Enterobacter sp. 638
Position: -107
Score: 10.1038
Sequence: ATCTTTGATTCCTTGCCA-(15)-TGTCAGTGGCGAGAAGGT
Locus tag: Ent638_4067
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: Ent638_4068
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: Ent638_4069
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Locus tag: Ent638_4070
Name: rhaF
Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
Locus tag: Ent638_4071
Name: rhaG
Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: Ent638_4072
Name: rhaH
Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: Ent638_4073
Name: rhaJ
Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: Ent638_4074
Name: rhaZ
Funciton: L-lactaldehyde reductase
Locus tag: Ent638_4075
Name: rhaM
Funciton: L-rhamnose mutarotase
rhaB-rhaA-rhaD-rhaF-rhaG-rhaH-rhaJ-rhaZ-rhaM -107 10.1 ATCTTTGATTCCTTGCCA-(15)-TGTCAGTGGCGAGAAGGT Ent638_4067
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -105
Score: 9.69397
Sequence: AGCTTTGTCATTTTGCCA-(15)-TGGCACTCATTGGAAGGT
Locus tag: ECA0440
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: ECA0439
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: ECA0438
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Locus tag: ECA0437
Name: rhaM
Funciton: L-rhamnose mutarotase
rhaB-rhaA-rhaD-rhaM -105 9.7 AGCTTTGTCATTTTGCCA-(15)-TGGCACTCATTGGAAGGT ECA0440
Escherichia coli str. K-12 substr. MG1655
Position: -105
Score: 11.0876
Sequence: ATCTTTCCCTGGTTGCCA-(14)-TGTCAGTAACGAGAAGGT
Locus tag: b3904
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: b3903
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: b3902
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Locus tag: b3901
Name: rhaM
Funciton: L-rhamnose mutarotase
rhaB-rhaA-rhaD-rhaM -105 11.1 ATCTTTCCCTGGTTGCCA-(14)-TGTCAGTAACGAGAAGGT b3904
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -106
Score: 10.516
Sequence: ACCTTTGCTTTCTTGCCA-(15)-TGTCCGTAACGAGAAGGT
Locus tag: KPN_04213
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: KPN_04212
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: KPN_04211
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Locus tag: KPN_04210
Name: rhaF
Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
Locus tag: KPN_04209
Name: rhaG
Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: KPN_04208
Name: rhaH
Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: KPN_04207
Name: rhaJ
Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: KPN_04206
Name: rhaZ
Funciton: L-lactaldehyde reductase
Locus tag: KPN_04205
Name: rhaM
Funciton: L-rhamnose mutarotase
rhaB-rhaA-rhaD-rhaF-rhaG-rhaH-rhaJ-rhaZ-rhaM -106 10.5 ACCTTTGCTTTCTTGCCA-(15)-TGTCCGTAACGAGAAGGT KPN_04213
Salmonella typhimurium LT2
Position: -105
Score: 11.341
Sequence: ATCTTTGCCTTGTTGCCA-(14)-TGTCAGTAACGAGAAGGT
Locus tag: STM4047
Name: rhaB
Funciton: Rhamnulokinase (EC 2.7.1.5)
Locus tag: STM4046
Name: rhaA
Funciton: L-rhamnose isomerase (EC 5.3.1.14)
Locus tag: STM4045
Name: rhaD
Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19)
Locus tag: STM4044
Name: rhaZ
Funciton: L-lactaldehyde reductase
Locus tag: STM4043
Name: rhaM
Funciton: L-rhamnose mutarotase
rhaB-rhaA-rhaD-rhaZ-rhaM -105 11.3 ATCTTTGCCTTGTTGCCA-(14)-TGTCAGTAACGAGAAGGT STM4047