Orthologous regulated operons containing rhaD gene

Properties
Regulog:	RhaS - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	AraC
Regulation mode:	activator
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Phylum:	Proteobacteria

Built upon 31 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Enterobacter sp. 638
Position: -107 Score: 10.1038 Sequence: ATCTTTGATTCCTTGCCA-(15)-TGTCAGTGGCGAGAAGGT Locus tag: Ent638_4067 Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) Locus tag: Ent638_4068 Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14) Locus tag: Ent638_4069 Name: rhaD Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) Locus tag: Ent638_4070 Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein Locus tag: Ent638_4071 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: Ent638_4072 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: Ent638_4073 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: Ent638_4074 Name: rhaZ Funciton: L-lactaldehyde reductase Locus tag: Ent638_4075 Name: rhaM Funciton: L-rhamnose mutarotase
rhaB-rhaA-rhaD-rhaF-rhaG-rhaH-rhaJ-rhaZ-rhaM	-107	10.1	ATCTTTGATTCCTTGCCA-(15)-TGTCAGTGGCGAGAAGGT	Ent638_4067
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -105 Score: 9.69397 Sequence: AGCTTTGTCATTTTGCCA-(15)-TGGCACTCATTGGAAGGT Locus tag: ECA0440 Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) Locus tag: ECA0439 Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14) Locus tag: ECA0438 Name: rhaD Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) Locus tag: ECA0437 Name: rhaM Funciton: L-rhamnose mutarotase
rhaB-rhaA-rhaD-rhaM	-105	9.7	AGCTTTGTCATTTTGCCA-(15)-TGGCACTCATTGGAAGGT	ECA0440
Escherichia coli str. K-12 substr. MG1655
Position: -105 Score: 11.0876 Sequence: ATCTTTCCCTGGTTGCCA-(14)-TGTCAGTAACGAGAAGGT Locus tag: b3904 Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) Locus tag: b3903 Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14) Locus tag: b3902 Name: rhaD Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) Locus tag: b3901 Name: rhaM Funciton: L-rhamnose mutarotase
rhaB-rhaA-rhaD-rhaM	-105	11.1	ATCTTTCCCTGGTTGCCA-(14)-TGTCAGTAACGAGAAGGT	b3904
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -106 Score: 10.516 Sequence: ACCTTTGCTTTCTTGCCA-(15)-TGTCCGTAACGAGAAGGT Locus tag: KPN_04213 Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) Locus tag: KPN_04212 Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14) Locus tag: KPN_04211 Name: rhaD Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) Locus tag: KPN_04210 Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein Locus tag: KPN_04209 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: KPN_04208 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: KPN_04207 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: KPN_04206 Name: rhaZ Funciton: L-lactaldehyde reductase Locus tag: KPN_04205 Name: rhaM Funciton: L-rhamnose mutarotase
rhaB-rhaA-rhaD-rhaF-rhaG-rhaH-rhaJ-rhaZ-rhaM	-106	10.5	ACCTTTGCTTTCTTGCCA-(15)-TGTCCGTAACGAGAAGGT	KPN_04213
Salmonella typhimurium LT2
Position: -105 Score: 11.341 Sequence: ATCTTTGCCTTGTTGCCA-(14)-TGTCAGTAACGAGAAGGT Locus tag: STM4047 Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) Locus tag: STM4046 Name: rhaA Funciton: L-rhamnose isomerase (EC 5.3.1.14) Locus tag: STM4045 Name: rhaD Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) Locus tag: STM4044 Name: rhaZ Funciton: L-lactaldehyde reductase Locus tag: STM4043 Name: rhaM Funciton: L-rhamnose mutarotase
rhaB-rhaA-rhaD-rhaZ-rhaM	-105	11.3	ATCTTTGCCTTGTTGCCA-(14)-TGTCAGTAACGAGAAGGT	STM4047