Regulon of RhaS in Citrobacter koseri ATCC BAA-895
| Regulator type: | Transcription factor |
| TF locus tag: | CKO_03099 |
| Regulator family: | AraC |
| Regulation mode: | activator |
| Biological process: | Rhamnose utilization |
| Effector: | Rhamnose |
| Regulog: | RhaS - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - AraC
- By effector - Rhamnose
- By pathway - Rhamnose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -160
Score: 10.7 Sequence: ACCTTTGCCTCCTTGCCA-(15)-TGTCAGTAACAGGAAGGT
Locus tag: CKO_03100
Name: rhaB Funciton: Rhamnulokinase (EC 2.7.1.5) |
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rhaB
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Rhamnulokinase (EC 2.7.1.5)
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Position: -147
Score: 11 Sequence: CTCTTTGTATTTTTGCCA-(15)-TGGCAAAAATGAAAAGGT
Locus tag: CKO_01081
Name: rhiT Funciton: Rhamnogalacturonide transporter
Locus tag: CKO_01082
Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) |
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rhiT
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Rhamnogalacturonide transporter
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rhiN
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Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
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Position: -245
Score: 10.5 Sequence: ACCTTCCTGTTACTGACA-(15)-TGGCAAGGAGGCAAAGGT
Locus tag: CKO_03099
Name: rhaS Funciton: L-rhamnose operon transcriptional activator RhaS, AraC family |
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rhaS
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L-rhamnose operon transcriptional activator RhaS, AraC family
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Position: -126
Score: 8.5 Sequence: ATAACGTGCTGGTTGCCA-(15)-CGGCAATCCTCAAAAGGT
Locus tag: CKO_03094
Name: rhaT Funciton: L-rhamnose:proton symporter |
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rhaT
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L-rhamnose:proton symporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |