Statistics of regulated genes

Genome	Genes	Operons
Azotobacter vinelandii AvOP
Pseudomonas aeruginosa PAO1	5	2
Pseudomonas entomophila L48	7	4
Pseudomonas fluorescens Pf-5	5	2
Pseudomonas mendocina ymp	6	3
Pseudomonas putida KT2440	6	3
Pseudomonas stutzeri A1501	4	1
Pseudomonas syringae pv. tomato str. DC3000	4	1

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes									Function
CRON 1.
pbuT2	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA0352: Xanthine/uracil permease	* Pseudomonas entomophila L48 Site: position = -127 score = 5.58281 sequence = AATTGACCTAAAAGTCAGCT Gene: PSEEN2224: Xanthine/uracil permease	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP3992: Xanthine/uracil permease	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Xanthine/uracil permease
CRON 2.
tsx	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1	* Pseudomonas entomophila L48 Site: position = -71 score = 4.70981 sequence = AGCTGACCCAAAAGACAAGA Gene: PSEEN1679: Nucleoside-binding outer membrane protein	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	* Pseudomonas putida KT2440 Site: position = -74 score = 4.80247 sequence = AGCTGACTCAAAAGACAAAA Gene: PP4293: Nucleoside-binding outer membrane protein	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Nucleoside-binding outer membrane protein
CRON 3.
rutR3	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA1504: Transcriptional regulator RutR of pyrimidine catabolism, TetR family	Pseudomonas entomophila L48 Gene: PSEEN1675: Transcriptional regulator RutR of pyrimidine catabolism, TetR family	Pseudomonas fluorescens Pf-5 Gene: PFL_1703: Transcriptional regulator RutR of pyrimidine catabolism, TetR family	* Pseudomonas mendocina ymp Site: position = -119 score = 5.247 sequence = ATTTGACTCAAGAGTCAGAT Gene: Pmen_2767: Transcriptional regulator RutR of pyrimidine catabolism, TetR family	Pseudomonas putida KT2440 Gene: PP4295: Transcriptional regulator RutR of pyrimidine catabolism, TetR family	Pseudomonas stutzeri A1501 Gene: PST_3101: Transcriptional regulator RutR of pyrimidine catabolism, TetR family	Pseudomonas syringae pv. tomato str. DC3000 Gene: PSPTO3698: Transcriptional regulator RutR of pyrimidine catabolism, TetR family	Transcriptional regulator RutR of pyrimidine catabolism, TetR family
CRON 4.
xdhA	Azotobacter vinelandii AvOP Gene: Avin_22290: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)	* Pseudomonas aeruginosa PAO1 Site: position = -139 score = 5.35349 sequence = ATTTGACTCAAAAGTCAGTT Site: position = -163 score = 4.14616 sequence = GACTGACCTACAGGTCAAAA Gene: PA1524: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)	* Pseudomonas entomophila L48 Site: position = -95 score = 5.941 sequence = TCTTGACCCAAAGGTCAGAA Site: position = -72 score = 5.28235 sequence = TATTGACCACAAGGTCAGGC Gene: PSEEN1765: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)	* Pseudomonas fluorescens Pf-5 Site: position = -76 score = 5.05284 sequence = CATTGACCGAAAAGTCAGAC Site: position = -99 score = 4.69346 sequence = TCCTGACCTTGAAGTCAGAA Gene: PFL_1889: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)	* Pseudomonas mendocina ymp Site: position = -123 score = 5.941 sequence = TGTTGACCCAAAAGTCAGAA Site: position = -146 score = 4.56974 sequence = AGCTGACCACAGGGTCAAAT Gene: Pmen_2751: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)	* Pseudomonas putida KT2440 Site: position = -93 score = 5.24233 sequence = TCTTGACCCTTGAGTCAGAA Site: position = -70 score = 4.73413 sequence = TATTGACCTGCTAGACAGGT Gene: PP4278: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)	* Pseudomonas stutzeri A1501 Site: position = -211 score = 5.7942 sequence = AGTTGACCGAAAAGTCAGAT Site: position = -234 score = 4.22533 sequence = CATTGACTTTTGAGTCAGGA Gene: PST_3081: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)	* Pseudomonas syringae pv. tomato str. DC3000 Site: position = -72 score = 4.53371 sequence = AATTGACCCAATTGGCAGAG Site: position = -95 score = 4.60453 sequence = TCCTGACTTAAGAGTCAGAA Gene: PSPTO3660: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)	Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
xdhB	Azotobacter vinelandii AvOP Gene: Avin_22280: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)	Pseudomonas aeruginosa PAO1 Gene: PA1523: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)	Pseudomonas entomophila L48 Gene: PSEEN1764: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)	Pseudomonas fluorescens Pf-5 Gene: PFL_1888: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)	Pseudomonas mendocina ymp Gene: Pmen_2752: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)	Pseudomonas putida KT2440 Gene: PP4279: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)	Pseudomonas stutzeri A1501 Gene: PST_3082: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)	Pseudomonas syringae pv. tomato str. DC3000 Gene: PSPTO3661: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)	Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
xdhC	Azotobacter vinelandii AvOP Gene: Avin_22270: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)	Pseudomonas aeruginosa PAO1 Gene: PA1522: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)	Pseudomonas entomophila L48 Gene: PSEEN1763: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)	Pseudomonas fluorescens Pf-5 Gene: PFL_1887: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)	Pseudomonas mendocina ymp Gene: Pmen_2753: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)	Pseudomonas putida KT2440 Gene: PP4280: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)	Pseudomonas stutzeri A1501 Gene: PST_3083: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)	Pseudomonas syringae pv. tomato str. DC3000 Gene: PSPTO3662: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)	XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
guaD	Azotobacter vinelandii AvOP Gene: Avin_22260: Guanine deaminase (EC 3.5.4.3)	Pseudomonas aeruginosa PAO1 Gene: PA1521: Guanine deaminase (EC 3.5.4.3)	Pseudomonas entomophila L48 Gene: PSEEN1762: Guanine deaminase (EC 3.5.4.3)	Pseudomonas fluorescens Pf-5 Gene: PFL_1886: Guanine deaminase (EC 3.5.4.3)	Pseudomonas mendocina ymp Gene: Pmen_2754: Guanine deaminase (EC 3.5.4.3)	Pseudomonas putida KT2440 Gene: PP4281: Guanine deaminase (EC 3.5.4.3)	Pseudomonas stutzeri A1501 Gene: PST_3084: Guanine deaminase (EC 3.5.4.3)	Pseudomonas syringae pv. tomato str. DC3000 Gene: PSPTO3663: Guanine deaminase (EC 3.5.4.3)	Guanine deaminase (EC 3.5.4.3)
CRON 5.
pbuT	Azotobacter vinelandii AvOP	* Pseudomonas aeruginosa PAO1 Site: position = -115 score = 5.84685 sequence = TCTTGACCCAGAGGTCAGAA Gene: PA1519: Xanthine/uracil permease	* Pseudomonas entomophila L48 Site: position = -121 score = 4.72878 sequence = TCCTGACCCAGAAGTCAACA Gene: PSEEN1759: Xanthine/uracil permease	* Pseudomonas fluorescens Pf-5 Site: position = -114 score = 5.20596 sequence = TCTTGACCCACAGGTCAACA Gene: PFL_4364: Xanthine/uracil permease	* Pseudomonas mendocina ymp Site: position = -123 score = 4.50729 sequence = TCTTGACCGCTCGGTCAACA Gene: Pmen_2756: Xanthine/uracil permease	* Pseudomonas putida KT2440 Site: position = -114 score = 5.31244 sequence = TCTTGACCCATAAGTCAACA Gene: PP4284: Xanthine/uracil permease	Pseudomonas stutzeri A1501 Gene: PST_3090: Xanthine/uracil permease	Pseudomonas syringae pv. tomato str. DC3000	Xanthine/uracil permease

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