Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of RutR3 in Pseudomonas mendocina ymp

Properties
Regulator type: Transcription factor
TF locus tag: Pmen_2767
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Regulog: RutR3 - Pseudomonadaceae
Statistics of regulated genes:
- Genes 6
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 23 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -119
Score: 5.2
Sequence: ATTTGACTCAAGAGTCAGAT
Locus tag: Pmen_2767
Name: rutR3
Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Pmen_2767
rutR3
Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Position: -146
Score: 4.6
Sequence: AGCTGACCACAGGGTCAAAT
Position: -123
Score: 5.9
Sequence: TGTTGACCCAAAAGTCAGAA
Locus tag: Pmen_2751
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: Pmen_2752
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: Pmen_2753
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: Pmen_2754
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
Pmen_2751
xdhA
Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Pmen_2752
xdhB
Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Pmen_2753
xdhC
XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Pmen_2754
guaD
Guanine deaminase (EC 3.5.4.3)
Position: -123
Score: 4.5
Sequence: TCTTGACCGCTCGGTCAACA
Locus tag: Pmen_2756
Name: pbuT
Funciton: Xanthine/uracil permease
Pmen_2756
pbuT
Xanthine/uracil permease
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