Regulon of RutR3 in Pseudomonas mendocina ymp

Properties
Regulator type:	Transcription factor
TF locus tag:	Pmen_2767
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Pyrimidine utilization
Effector:	Uracil
Regulog:	RutR3 - Pseudomonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 23 sites [see more]

Member of regulog collections

By trascription factor - RutR
By TF family - TetR
By effector - Uracil
By pathway - Pyrimidine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -119 Score: 5.2 Sequence: ATTTGACTCAAGAGTCAGAT Locus tag: Pmen_2767 Name: rutR3 Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
	Pmen_2767	rutR3	Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Position: -146 Score: 4.6 Sequence: AGCTGACCACAGGGTCAAAT Position: -123 Score: 5.9 Sequence: TGTTGACCCAAAAGTCAGAA Locus tag: Pmen_2751 Name: xdhA Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4) Locus tag: Pmen_2752 Name: xdhB Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) Locus tag: Pmen_2753 Name: xdhC Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase) Locus tag: Pmen_2754 Name: guaD Funciton: Guanine deaminase (EC 3.5.4.3)
	Pmen_2751	xdhA	Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
	Pmen_2752	xdhB	Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
	Pmen_2753	xdhC	XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
	Pmen_2754	guaD	Guanine deaminase (EC 3.5.4.3)
Position: -123 Score: 4.5 Sequence: TCTTGACCGCTCGGTCAACA Locus tag: Pmen_2756 Name: pbuT Funciton: Xanthine/uracil permease
	Pmen_2756	pbuT	Xanthine/uracil permease

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