Profile of regulator RutR3 in Pseudomonadaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Pyrimidine utilization |
| Effector: |
Uracil |
| Regulog: |
RutR3 - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA1524 |
xdhA |
-139 |
5.4 |
ATTTGACTCAAAAGTCAGTT |
|
PA1524 |
xdhA |
-163 |
4.1 |
GACTGACCTACAGGTCAAAA |
|
PA1519 |
pbuT |
-115 |
5.8 |
TCTTGACCCAGAGGTCAGAA |
|
Pseudomonas entomophila L48
|
|
PSEEN1765 |
xdhA |
-95 |
5.9 |
TCTTGACCCAAAGGTCAGAA |
|
PSEEN1759 |
pbuT |
-121 |
4.7 |
TCCTGACCCAGAAGTCAACA |
|
PSEEN1679 |
tsx |
-71 |
4.7 |
AGCTGACCCAAAAGACAAGA |
|
PSEEN2224 |
pbuT2 |
-127 |
5.6 |
AATTGACCTAAAAGTCAGCT |
|
PSEEN1765 |
xdhA |
-72 |
5.3 |
TATTGACCACAAGGTCAGGC |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_1889 |
xdhA |
-76 |
5.1 |
CATTGACCGAAAAGTCAGAC |
|
PFL_1889 |
xdhA |
-99 |
4.7 |
TCCTGACCTTGAAGTCAGAA |
|
PFL_4364 |
pbuT |
-114 |
5.2 |
TCTTGACCCACAGGTCAACA |
|
Pseudomonas mendocina ymp
|
|
Pmen_2751 |
xdhA |
-123 |
5.9 |
TGTTGACCCAAAAGTCAGAA |
|
Pmen_2751 |
xdhA |
-146 |
4.6 |
AGCTGACCACAGGGTCAAAT |
|
Pmen_2756 |
pbuT |
-123 |
4.5 |
TCTTGACCGCTCGGTCAACA |
|
Pmen_2767 |
rutR3 |
-119 |
5.2 |
ATTTGACTCAAGAGTCAGAT |
|
Pseudomonas putida KT2440
|
|
PP4278 |
xdhA |
-93 |
5.2 |
TCTTGACCCTTGAGTCAGAA |
|
PP4278 |
xdhA |
-70 |
4.7 |
TATTGACCTGCTAGACAGGT |
|
PP4284 |
pbuT |
-114 |
5.3 |
TCTTGACCCATAAGTCAACA |
|
PP4293 |
tsx |
-74 |
4.8 |
AGCTGACTCAAAAGACAAAA |
|
Pseudomonas stutzeri A1501
|
|
PST_3081 |
xdhA |
-211 |
5.8 |
AGTTGACCGAAAAGTCAGAT |
|
PST_3081 |
xdhA |
-234 |
4.2 |
CATTGACTTTTGAGTCAGGA |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO3660 |
xdhA |
-72 |
4.5 |
AATTGACCCAATTGGCAGAG |
|
PSPTO3660 |
xdhA |
-95 |
4.6 |
TCCTGACTTAAGAGTCAGAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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