Statistics of regulated genes

Genome	Genes	Operons
Erythrobacter litoralis HTCC2594	2	2
Erythrobacter sp. NAP1	2	2
Novosphingobium aromaticivorans DSM 12444	2	2
Sphingopyxis alaskensis RB2256	3	3
Sphingobium japonicum UT26S	4	4
Sphingomonas wittichii RW1	2	2
Zymomonas mobilis subsp. mobilis ZM4	7	6

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes								Function
CRON 1.
omr1	Erythrobacter litoralis HTCC2594	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444	Sphingopyxis alaskensis RB2256	Sphingobium japonicum UT26S	Sphingomonas wittichii RW1	* Zymomonas mobilis subsp. mobilis ZM4 Site: position = -35 score = 5.27228 sequence = GATATGATATATTATATCATCTA Gene: ZMO0795: Predicted zinc-regulated TonB-dependent outer membrane transporter	Predicted zinc-regulated TonB-dependent outer membrane transporter
CRON 2.
omr	* Erythrobacter litoralis HTCC2594 Site: position = -89 score = 5.10701 sequence = ATAATGTTATTCTGTATCATCCG Gene: ELI_11505: Predicted zinc-regulated TonB-dependent outer membrane transporter	* Erythrobacter sp. NAP1 Site: position = -56 score = 5.63837 sequence = ACGTTGTTACATTGTAACGTTAT Gene: NAP1_14638: Predicted zinc-regulated TonB-dependent outer membrane transporter	* Novosphingobium aromaticivorans DSM 12444 Site: position = -109 score = 5.6322 sequence = GATATGTTATCTTGTAACATGAC Gene: Saro_0754: Predicted zinc-regulated TonB-dependent outer membrane transporter	* Sphingopyxis alaskensis RB2256 Site: position = -67 score = 5.29188 sequence = TCATTGTGACAGTATATCATTAC Gene: Sala_1894: Predicted zinc-regulated TonB-dependent outer membrane transporter	*2 Sphingobium japonicum UT26S Site: position = -68 score = 5.34428 sequence = GTATTGATATGCTATATCATTTC Gene: SJA_C1-31170: Predicted zinc-regulated TonB-dependent outer membrane transporter Site: position = -111 score = 5.76774 sequence = GAGATGTTATCTTGTATCATCGT Gene: SJA_C1-18900: Predicted zinc-regulated TonB-dependent outer membrane transporter	Sphingomonas wittichii RW1 Gene: Swit_0540: Predicted zinc-regulated TonB-dependent outer membrane transporter	Zymomonas mobilis subsp. mobilis ZM4	Predicted zinc-regulated TonB-dependent outer membrane transporter
CRON 3.
tonB1	Erythrobacter litoralis HTCC2594	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444	* Sphingopyxis alaskensis RB2256 Site: position = -91 score = 5.59794 sequence = ATGACGTGATGTTATAACATCAT Gene: Sala_2946: Ferric siderophore transport system, periplasmic binding protein TonB	* Sphingobium japonicum UT26S Site: position = -88 score = 5.19871 sequence = TAAATTTAATGTTGCAACATATC Gene: SJA_C1-02890: Ferric siderophore transport system, periplasmic binding protein TonB	* Sphingomonas wittichii RW1 Site: position = -70 score = 5.11565 sequence = CCATCGTAATGATGTATCATTGC Gene: Swit_2441: Ferric siderophore transport system, periplasmic binding protein TonB	Zymomonas mobilis subsp. mobilis ZM4	Ferric siderophore transport system, periplasmic binding protein TonB
CRON 4.
tonB2	* Erythrobacter litoralis HTCC2594 Site: position = -85 score = 6.02872 sequence = TAGATGTTATGTTGTCACATTAC Gene: ELI_02180: Ferric siderophore transport system, periplasmic binding protein TonB	* Erythrobacter sp. NAP1 Site: position = -97 score = 5.80879 sequence = CAAATGTTATGTTGCAACATTCT Gene: NAP1_01425: Ferric siderophore transport system, periplasmic binding protein TonB	Novosphingobium aromaticivorans DSM 12444	Sphingopyxis alaskensis RB2256	Sphingobium japonicum UT26S	Sphingomonas wittichii RW1	Zymomonas mobilis subsp. mobilis ZM4	Ferric siderophore transport system, periplasmic binding protein TonB
CRON 5.
omr2	Erythrobacter litoralis HTCC2594	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444	Sphingopyxis alaskensis RB2256	Sphingobium japonicum UT26S	Sphingomonas wittichii RW1	* Zymomonas mobilis subsp. mobilis ZM4 Site: position = -46 score = 5.98616 sequence = GAAATGTTATGTTATCACATAAC Gene: ZMO0902: Predicted zinc-regulated TonB-dependent outer membrane transporter	Predicted zinc-regulated TonB-dependent outer membrane transporter
CRON 6.
feoA	Erythrobacter litoralis HTCC2594 Gene: ELI_00185: Ferrous iron transport protein A	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444 Gene: Saro_2850: Ferrous iron transport protein A	Sphingopyxis alaskensis RB2256 Gene: Sala_2986: Ferrous iron transport protein A	Sphingobium japonicum UT26S Gene: SJA_C1-02970: Ferrous iron transport protein A	Sphingomonas wittichii RW1 Gene: Swit_2450: Ferrous iron transport protein A	* Zymomonas mobilis subsp. mobilis ZM4 Site: position = -186 score = 5.95884 sequence = ACATTGTTATGTTATAATATTAC Gene: ZMO1540: Ferrous iron transport protein A	Ferrous iron transport protein A
feoB	Erythrobacter litoralis HTCC2594 Gene: ELI_00190: Ferrous iron transport protein B	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444 Gene: Saro_2849: Ferrous iron transport protein B	Sphingopyxis alaskensis RB2256 Gene: Sala_2987: Ferrous iron transport protein B	Sphingobium japonicum UT26S Gene: SJA_C1-02980: Ferrous iron transport protein B	Sphingomonas wittichii RW1 Gene: Swit_2451: Ferrous iron transport protein B	Zymomonas mobilis subsp. mobilis ZM4 Gene: ZMO1541: Ferrous iron transport protein B	Ferrous iron transport protein B
CRON 7.
czdD	Erythrobacter litoralis HTCC2594	Erythrobacter sp. NAP1	Novosphingobium aromaticivorans DSM 12444	Sphingopyxis alaskensis RB2256	Sphingobium japonicum UT26S	Sphingomonas wittichii RW1	* Zymomonas mobilis subsp. mobilis ZM4 Site: position = -53 score = 5.27496 sequence = GTAATGTGATATTATAACTTTTG Gene: ZMO0866: Cobalt-zinc-cadmium resistance protein CzcD	Cobalt-zinc-cadmium resistance protein CzcD
CRON 8.
omr3	Erythrobacter litoralis HTCC2594 Gene: ELI_00385: Predicted zinc-regulated TonB-dependent outer membrane transporter	Erythrobacter sp. NAP1 Gene: NAP1_15908: Predicted zinc-regulated TonB-dependent outer membrane transporter	Novosphingobium aromaticivorans DSM 12444 Gene: Saro_3280: Predicted zinc-regulated TonB-dependent outer membrane transporter	Sphingopyxis alaskensis RB2256 Gene: Sala_2091: Predicted zinc-regulated TonB-dependent outer membrane transporter	Sphingobium japonicum UT26S	Sphingomonas wittichii RW1	* Zymomonas mobilis subsp. mobilis ZM4 Site: position = -154 score = 5.21969 sequence = TTAATGTTTTATTATAAAATAAT Gene: ZMO1822: Predicted zinc-regulated TonB-dependent outer membrane transporter	Predicted zinc-regulated TonB-dependent outer membrane transporter
CRON 9.
PF03203	Erythrobacter litoralis HTCC2594 Gene: ELI_12845: MerC-like membrane protein	Erythrobacter sp. NAP1 Gene: NAP1_13188: MerC-like membrane protein	* Novosphingobium aromaticivorans DSM 12444 Site: position = -35 score = 5.45963 sequence = ACTATGTAACATTATAACATAAA Gene: Saro_3289: MerC-like membrane protein	* Sphingopyxis alaskensis RB2256 Site: position = -71 score = 5.56521 sequence = ACAATGTGATGTTGTAACCTTGG Gene: Sala_0375: MerC-like membrane protein	* Sphingobium japonicum UT26S Site: position = -49 score = 5.70742 sequence = GCGATGATATGTTGTAACTTTCC Gene: SJA_C1-07260: MerC-like membrane protein	* Sphingomonas wittichii RW1 Site: position = -55 score = 5.39774 sequence = GCAATGATATATTGTATCTTCGA Gene: Swit_1463: MerC-like membrane protein	* Zymomonas mobilis subsp. mobilis ZM4 Site: position = -110 score = 5.03007 sequence = CCGCCGTTACGTTGTAACATATA Gene: ZMO0885: MerC-like membrane protein	MerC-like membrane protein

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