Regulog NarP - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | LuxR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrate and nitrite respiration |
| Effector: | Nitrate; Nitrite |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - NarP
- By TF family - LuxR
- By effector - Nitrate
- By effector - Nitrite
- By pathway - Nitrate and nitrite respiration
| Genome | Genes | Operons |
|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | 95 | 26 |
| Salmonella typhimurium LT2 | 87 | 23 |
| Citrobacter koseri ATCC BAA-895 | 74 | 25 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | ||
| Enterobacter sp. 638 | ||
| Erwinia amylovora ATCC 49946 | ||
| Yersinia pestis KIM | 16 | 6 |
| Serratia proteamaculans 568 | 46 | 12 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 45 | 13 |
| Edwardsiella tarda EIB202 | 29 | 6 |
| Proteus mirabilis HI4320 | 11 | 4 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 1 | 1 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| dcuB |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -352 score = 4.92501 sequence = TACCCACAAATGGGTA Gene: b4123: C4-dicarboxylate transporter |
Gene: STM4301: C4-dicarboxylate transporter |
*
Citrobacter koseri ATCC BAA-895 Site: position = -362 score = 4.73361 sequence = TAACTATAAAGGAGTA Gene: CKO_03748: C4-dicarboxylate transporter |
Gene: KPN_04367: C4-dicarboxylate transporter |
Gene: Ent638_2479: C4-dicarboxylate transporter |
|
Gene: y0901: C4-dicarboxylate transporter |
Gene: Spro_3863: C4-dicarboxylate transporter |
Gene: ECA1533: C4-dicarboxylate transporter |
Gene: ETAE_2844: C4-dicarboxylate transporter |
Gene: PMI0389: C4-dicarboxylate transporter |
|
C4-dicarboxylate transporter |
| fumB |
Gene: b4122: Fumarate hydratase class I, (EC 4.2.1.2) |
Gene: STM4300: Fumarate hydratase class I, (EC 4.2.1.2) |
Gene: CKO_03749: Fumarate hydratase class I, (EC 4.2.1.2) |
|
|
|
|
|
|
|
|
|
Fumarate hydratase class I, (EC 4.2.1.2) |
| CRON 2. | |||||||||||||
| narX |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -228 score = 3.97118 sequence = TTACCCATAGTGAGTA Site: position = -118 score = 3.84236 sequence = TAACTCTTTCCGGGTA Gene: b1222: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
*
Salmonella typhimurium LT2 Site: position = -230 score = 4.27079 sequence = TTACCCTTAATGAGTA Site: position = -120 score = 4.46123 sequence = TAACTCGTTATAGGTA Gene: STM1766: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -139 score = 4.46123 sequence = TAACTCGTTATAGGTA Site: position = -249 score = 4.44886 sequence = TGCCCCTTAGTGAGTA Gene: CKO_01297: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
Gene: KPN_02216: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
Gene: Ent638_2317: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
|
Gene: y2351: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
*
Serratia proteamaculans 568 Site: position = -138 score = 4.71071 sequence = TACTTCGTTAGAGGTA Gene: Spro_2899: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -217 score = 4.22499 sequence = CACTCCTTAATGAGTA Site: position = -106 score = 4.70009 sequence = TACTCACTAGTGGGTA Gene: ECA2029: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
|
*
Proteus mirabilis HI4320 Site: position = -73 score = 4.53557 sequence = TACTCCCTTTGGAGTA Gene: PMI3569: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
Gene: plu2041: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) |
| narL |
Gene: b1221: Nitrate/nitrite response regulator protein NarL, LuxR family |
Gene: STM1767: Nitrate/nitrite response regulator protein NarL, LuxR family |
Gene: CKO_01296: Nitrate/nitrite response regulator protein NarL, LuxR family |
Gene: KPN_02217: Nitrate/nitrite response regulator protein NarL, LuxR family |
Gene: Ent638_2318: Nitrate/nitrite response regulator protein NarL, LuxR family |
|
|
Gene: Spro_2900: Nitrate/nitrite response regulator protein NarL, LuxR family |
Gene: ECA2028: Nitrate/nitrite response regulator protein NarL, LuxR family |
|
Gene: PMI3568: Nitrate/nitrite response regulator protein NarL, LuxR family |
|
Nitrate/nitrite response regulator protein NarL, LuxR family |
| CRON 3. | |||||||||||||
| hcp |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -143 score = 4.48329 sequence = TACCTCTCTGGCGGTA Gene: b0873: Hydroxylamine reductase (EC 1.7.-.-) |
*
Salmonella typhimurium LT2 Site: position = -143 score = 4.83959 sequence = TACCTCTTTGGCGGTA Gene: STM0937: Hydroxylamine reductase (EC 1.7.-.-) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -109 score = 4.31135 sequence = TACCTCCCTGGCGGTA Gene: CKO_02206: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: KPN_00907: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: Ent638_1390: Hydroxylamine reductase (EC 1.7.-.-) |
|
Gene: y2819: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: Spro_1666: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: ECA2662: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: ETAE_2215: Hydroxylamine reductase (EC 1.7.-.-) |
Gene: PMI2112: Hydroxylamine reductase (EC 1.7.-.-) |
|
Hydroxylamine reductase (EC 1.7.-.-) |
| hcr |
Gene: b0872: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: STM0936: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: CKO_02207: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: KPN_00906: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: Ent638_1389: NADH oxidoreductase hcr (EC 1.-.-.-) |
|
Gene: y2820: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: Spro_1665: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: ECA2663: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: ETAE_2216: NADH oxidoreductase hcr (EC 1.-.-.-) |
Gene: PMI2111: NADH oxidoreductase hcr (EC 1.-.-.-) |
|
NADH oxidoreductase hcr (EC 1.-.-.-) |
| CRON 4. | |||||||||||||
| dnrN |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -79 score = 3.66471 sequence = TGCTACGTAAGGGTTA Gene: b4209: Nitric oxide-dependent regulator DnrN |
*
Salmonella typhimurium LT2 Site: position = -78 score = 3.92948 sequence = CACCCCGAAAGAGTTA Gene: STM4399: Nitric oxide-dependent regulator DnrN |
*
Citrobacter koseri ATCC BAA-895 Site: position = -78 score = 3.90292 sequence = TGACCCGAAAGGGTTA Gene: CKO_03623: Nitric oxide-dependent regulator DnrN |
Gene: KPN_04602: Nitric oxide-dependent regulator DnrN |
Gene: Ent638_0379: Nitric oxide-dependent regulator DnrN |
|
*
Yersinia pestis KIM Site: position = -108 score = 4.41712 sequence = TACCCACTTGGAGTTA Gene: y0652: Nitric oxide-dependent regulator DnrN |
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -81 score = 4.77722 sequence = TACCTCGTAAGCGGTA Gene: ECA3606: Nitric oxide-dependent regulator DnrN |
Gene: ETAE_0372: Nitric oxide-dependent regulator DnrN |
|
|
Nitric oxide-dependent regulator DnrN |
| CRON 5. | |||||||||||||
| pdhR |
Gene: b0113: Pyruvate utilization transcriptional regulator PdhR, GntR family |
*
Salmonella typhimurium LT2 Site: position = -204 score = 4.31531 sequence = TACCTCCTGGTGGGTA Gene: STM0151: Pyruvate utilization transcriptional regulator PdhR, GntR family |
*
Citrobacter koseri ATCC BAA-895 Site: position = -204 score = 4.19086 sequence = TACTCCCAGGGGAGTA Gene: CKO_03260: Pyruvate utilization transcriptional regulator PdhR, GntR family |
Gene: KPN_00117: Pyruvate utilization transcriptional regulator PdhR, GntR family |
Gene: Ent638_0659: Pyruvate utilization transcriptional regulator PdhR, GntR family |
Gene: EAM_0746: Pyruvate utilization transcriptional regulator PdhR, GntR family |
Gene: y0766: Pyruvate utilization transcriptional regulator PdhR, GntR family |
*
Serratia proteamaculans 568 Site: position = -198 score = 4.16926 sequence = TACCTCGTAAATGGTA Gene: Spro_4012: Pyruvate utilization transcriptional regulator PdhR, GntR family |
Gene: ECA3790: Pyruvate utilization transcriptional regulator PdhR, GntR family |
Gene: ETAE_0658: Pyruvate utilization transcriptional regulator PdhR, GntR family |
Gene: PMI2047: Pyruvate utilization transcriptional regulator PdhR, GntR family |
Gene: plu3624: Pyruvate utilization transcriptional regulator PdhR, GntR family |
Pyruvate utilization transcriptional regulator PdhR, GntR family |
| aceE |
Gene: b0114: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: STM0152: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: CKO_03259: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: KPN_00118: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Ent638_0660: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: EAM_0747: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: y0767: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: Spro_4011: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: ECA3789: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: ETAE_0659: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: PMI2046: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Gene: plu3623: Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
Pyruvate dehydrogenase E1 component (EC 1.2.4.1) |
| aceF |
Gene: b0115: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: STM0153: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: CKO_03258: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: KPN_00119: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Ent638_0661: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: EAM_0748: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: y0768: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: Spro_4010: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: ECA3788: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: ETAE_0660: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: PMI2045: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Gene: plu3622: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
| lpd |
Gene: b0116: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: STM0154: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: CKO_03256: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: KPN_00120: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: Ent638_0662: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: EAM_0749: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: y0769: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: Spro_4009: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: ECA3787: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: ETAE_0662: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: PMI2044: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Gene: plu3621: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) |
| CRON 6. | |||||||||||||
| arcB |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -112 score = 4.56634 sequence = TACCTCCAACGGAGTA Gene: b3210: Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
*
Salmonella typhimurium LT2 Site: position = -48 score = 4.28554 sequence = TTCCCATAATTGGGTA Gene: STM3328: Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -49 score = 3.75696 sequence = TGCTCAGAATTGAGTA Gene: CKO_04614: Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
Gene: KPN_03619: Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
|
Gene: EAM_3110: Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
Gene: y0126: Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
Gene: Spro_4342: Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
Gene: ECA0314: Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
Gene: ETAE_0529: Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
Gene: PMI3678: Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
|
Aerobic respiration control sensor protein arcB (EC 2.7.3.-) |
| CRON 7. | |||||||||||||
| yfbV |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -104 score = 4.3416 sequence = TACCTGATAGTGGGTA Gene: b2295: Predicted membrane protein |
*
Salmonella typhimurium LT2 Site: position = -104 score = 4.3416 sequence = TACCTGATAGTGGGTA Gene: STM2336: Predicted membrane protein |
*
Citrobacter koseri ATCC BAA-895 Site: position = -105 score = 4.3416 sequence = TACCTGATAGTGGGTA Gene: CKO_00500: Predicted membrane protein |
Gene: KPN_02686: Predicted membrane protein |
Gene: Ent638_2839: Predicted membrane protein |
Gene: EAM_2300: Predicted membrane protein |
Gene: y1623: Predicted membrane protein |
Gene: Spro_3315: Predicted membrane protein |
Gene: ECA3038: Predicted membrane protein |
Gene: ETAE_2396: Predicted membrane protein |
Gene: PMI1770: Predicted membrane protein |
Gene: plu3094: Predicted membrane protein |
Predicted membrane protein |
| yfbU |
Gene: b2294: Conserved hypothetical protein |
Gene: STM2335: Conserved hypothetical protein |
Gene: CKO_00501: Conserved hypothetical protein |
2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_02685: Conserved hypothetical protein Gene: KPN_02684: Conserved hypothetical protein |
Gene: Ent638_2838: Conserved hypothetical protein |
|
Gene: y1624: Conserved hypothetical protein |
Gene: Spro_3314: Conserved hypothetical protein |
Gene: ECA3037: Conserved hypothetical protein |
Gene: ETAE_2395: Conserved hypothetical protein |
Gene: PMI1769: Conserved hypothetical protein |
|
Conserved hypothetical protein |
| yfbT |
Gene: b2293: Predicted phosphatase |
Gene: STM2334: Predicted phosphatase |
Gene: CKO_00502: Predicted phosphatase |
Gene: KPN_02683: Predicted phosphatase |
Gene: Ent638_2837: Predicted phosphatase |
Gene: EAM_2299: Predicted phosphatase |
Gene: y1625: Predicted phosphatase |
Gene: Spro_3313: Predicted phosphatase |
Gene: ECA3036: Predicted phosphatase |
Gene: ETAE_2394: Predicted phosphatase |
Gene: PMI1768: Predicted phosphatase |
|
Predicted phosphatase |
| yfbS |
Gene: b2292: Predicted transport protein |
Gene: STM2333: Predicted transport protein |
Gene: CKO_00503: Predicted transport protein |
Gene: KPN_02682: Predicted transport protein |
Gene: Ent638_2836: Predicted transport protein |
|
Gene: y1626: Predicted transport protein |
Gene: Spro_3312: Predicted transport protein |
Gene: ECA3035: Predicted transport protein |
Gene: ETAE_2393: Predicted transport protein |
Gene: PMI1767: Predicted transport protein |
Gene: plu3093: Predicted transport protein |
Predicted transport protein |
| CRON 8. | |||||||||||||
| atpI |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -31 score = 4.5667 sequence = TACCTCGAAGGGAGCA Gene: b3739: ATP synthase maturation |
*
Salmonella typhimurium LT2 Site: position = -30 score = 4.46298 sequence = TACCTCGAAGTGAGCA Gene: STM3872: ATP synthase maturation |
*
Citrobacter koseri ATCC BAA-895 Site: position = -30 score = 4.5667 sequence = TACCTCGAAGGGAGCA Gene: CKO_00079: ATP synthase maturation |
Gene: KPN_04144: ATP synthase maturation |
Gene: Ent638_4125: ATP synthase maturation |
Gene: EAM_3481: ATP synthase maturation |
Gene: y4142: ATP synthase maturation |
*
Serratia proteamaculans 568 Site: position = -33 score = 4.59097 sequence = TACCTCCTCAGGGGTA Gene: Spro_0001: ATP synthase maturation |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -33 score = 4.30287 sequence = TACCTCTGAAAAGGTA Gene: ECA4519: ATP synthase maturation |
*
Edwardsiella tarda EIB202 Site: position = -156 score = 4.41903 sequence = TACCTCCTGGGGGGTA Gene: ETAE_3526: ATP synthase maturation |
Gene: PMI3057: ATP synthase maturation |
Gene: plu0047: ATP synthase maturation |
ATP synthase maturation |
| atpB |
Gene: b3738: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: STM3871: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: CKO_00078: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: KPN_04143: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: Ent638_4126: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: EAM_3480: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: y4141: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: Spro_0002: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: ECA4518: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: ETAE_3527: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: PMI3058: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
Gene: plu0046: ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
ATP synthase, F0 complex, A chain (EC 3.6.3.14) |
| atpE |
Gene: b3737: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: STM3870: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: CKO_00077: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: KPN_04142: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: Ent638_4127: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: EAM_3479: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: y4140: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: Spro_0003: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: ECA4517: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: ETAE_3528: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: PMI3059: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
Gene: plu0045: ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
ATP synthase, F0 complex, C chain (EC 3.6.3.14) |
| atpF |
Gene: b3736: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: STM3869: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: CKO_00076: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: KPN_04141: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: Ent638_4128: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: EAM_3478: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: y4139: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: Spro_0004: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: ECA4516: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: ETAE_3529: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: PMI3060: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
Gene: plu0044: ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
ATP synthase, F0 complex, B chain (EC 3.6.3.14) |
| atpH |
Gene: b3735: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: STM3868: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: CKO_00075: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: KPN_04140: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: Ent638_4129: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: EAM_3477: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: y4138: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: Spro_0005: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: ECA4515: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: ETAE_3530: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: PMI3061: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
Gene: plu0043: ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
ATP synthase, F1 complex, delta chain (EC 3.6.3.14) |
| atpA |
Gene: b3734: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: STM3867: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: CKO_00073: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: KPN_04139: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: Ent638_4130: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: EAM_3476: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: y4137: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: Spro_0006: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: ECA4514: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: ETAE_3531: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: PMI3062: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
Gene: plu0042: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
ATP synthase, F1 complex, alpha chain (EC 3.6.3.14) |
| atpG |
Gene: b3733: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: STM3866: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: CKO_00071: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: KPN_04138: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: Ent638_4131: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: EAM_3475: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: y4136: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: Spro_0007: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: ECA4513: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: ETAE_3532: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: PMI3063: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
Gene: plu0041: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
ATP synthase, F1 complex, gamma chain (EC 3.6.3.14) |
| atpD |
Gene: b3732: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: STM3865: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: CKO_00070: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: KPN_04137: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: Ent638_4132: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: EAM_3474: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: y4135: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: Spro_0008: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: ECA4512: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: ETAE_3533: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: PMI3064: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
Gene: plu0040: ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
ATP synthase, F1 complex, beta chain (EC 3.6.3.14) |
| atpC |
Gene: b3731: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: STM3864: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: CKO_00069: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: KPN_04136: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: Ent638_4133: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: EAM_3473: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: y4134: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: Spro_0009: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: ECA4511: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: ETAE_3534: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: PMI3065: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
Gene: plu0039: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14) |
| CRON 9. | |||||||||||||
| fdnG |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -141 score = 4.32373 sequence = TACCGCTATTGAGGTA Gene: b1474: Formate dehydrogenase N, alpha subunit (EC 1.2.1.2) |
*
Salmonella typhimurium LT2 Site: position = -188 score = 4.13859 sequence = TACCTCCCTGGAGTTA Gene: STM1570: Formate dehydrogenase N, alpha subunit (EC 1.2.1.2) |
|
Gene: KPN_01867: Formate dehydrogenase N, alpha subunit (EC 1.2.1.2) |
3
Enterobacter sp. 638 Gene: Ent638_1750: Formate dehydrogenase N, alpha subunit (EC 1.2.1.2) Gene: Ent638_2055: Formate dehydrogenase N, alpha subunit (EC 1.2.1.2) Gene: Ent638_2054: Formate dehydrogenase N, alpha subunit (EC 1.2.1.2) |
|
|
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -122 score = 4.33042 sequence = TACCCCTTTGTAGGTG Gene: ECA1408: Formate dehydrogenase N, alpha subunit (EC 1.2.1.2) |
|
|
|
Formate dehydrogenase N, alpha subunit (EC 1.2.1.2) |
| fdnH |
Gene: b1475: Formate dehydrogenase N, beta subunit (EC 1.2.1.2) |
Gene: STM1569: Formate dehydrogenase N, beta subunit (EC 1.2.1.2) |
Gene: CKO_01514: Formate dehydrogenase N, beta subunit (EC 1.2.1.2) |
Gene: KPN_01866: Formate dehydrogenase N, beta subunit (EC 1.2.1.2) |
2
Enterobacter sp. 638 Gene: Ent638_2053: Formate dehydrogenase N, beta subunit (EC 1.2.1.2) Gene: Ent638_1751: Formate dehydrogenase N, beta subunit (EC 1.2.1.2) |
|
|
|
Gene: ECA1407: Formate dehydrogenase N, beta subunit (EC 1.2.1.2) |
|
|
|
Formate dehydrogenase N, beta subunit (EC 1.2.1.2) |
| fdnI |
Gene: b1476: Formate dehydrogenase N, gamma subunit (EC 1.2.1.2) |
Gene: STM1568: Formate dehydrogenase N, gamma subunit (EC 1.2.1.2) |
Gene: CKO_01515: Formate dehydrogenase N, gamma subunit (EC 1.2.1.2) |
Gene: KPN_01865: Formate dehydrogenase N, gamma subunit (EC 1.2.1.2) |
2
Enterobacter sp. 638 Gene: Ent638_1752: Formate dehydrogenase N, gamma subunit (EC 1.2.1.2) Gene: Ent638_2052: Formate dehydrogenase N, gamma subunit (EC 1.2.1.2) |
|
|
|
Gene: ECA1406: Formate dehydrogenase N, gamma subunit (EC 1.2.1.2) |
|
|
|
Formate dehydrogenase N, gamma subunit (EC 1.2.1.2) |
| CRON 10. | |||||||||||||
| frdA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -101 score = 4.691 sequence = TACCTATAAAGGAGCA Gene: b4154: Fumarate reductase subunit A (EC 1.3.5.4) |
*
Salmonella typhimurium LT2 Site: position = -100 score = 4.73757 sequence = TACCCATAAAGGAGCA Gene: STM4343: Fumarate reductase subunit A (EC 1.3.5.4) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -60 score = 4.691 sequence = TACCTATAAAGGAGCA Gene: CKO_03678: Fumarate reductase subunit A (EC 1.3.5.4) |
Gene: KPN_04553: Fumarate reductase subunit A (EC 1.3.5.4) |
Gene: Ent638_0343: Fumarate reductase subunit A (EC 1.3.5.4) |
|
Gene: y0617: Fumarate reductase subunit A (EC 1.3.5.4) |
Gene: Spro_0419: Fumarate reductase subunit A (EC 1.3.5.4) |
Gene: ECA3969: Fumarate reductase subunit A (EC 1.3.5.4) |
Gene: ETAE_0338: Fumarate reductase subunit A (EC 1.3.5.4) |
Gene: PMI3588: Fumarate reductase subunit A (EC 1.3.5.4) |
Gene: plu4124: Fumarate reductase subunit A (EC 1.3.5.4) |
Fumarate reductase subunit A (EC 1.3.5.4) |
| frdB |
Gene: b4153: Fumarate reductase subunit B (EC 1.3.5.4) |
Gene: STM4342: Fumarate reductase subunit B (EC 1.3.5.4) |
Gene: CKO_03679: Fumarate reductase subunit B (EC 1.3.5.4) |
Gene: KPN_04552: Fumarate reductase subunit B (EC 1.3.5.4) |
Gene: Ent638_0342: Fumarate reductase subunit B (EC 1.3.5.4) |
|
Gene: y0616: Fumarate reductase subunit B (EC 1.3.5.4) |
Gene: Spro_0418: Fumarate reductase subunit B (EC 1.3.5.4) |
Gene: ECA3970: Fumarate reductase subunit B (EC 1.3.5.4) |
Gene: ETAE_0337: Fumarate reductase subunit B (EC 1.3.5.4) |
Gene: PMI3587: Fumarate reductase subunit B (EC 1.3.5.4) |
Gene: plu4125: Fumarate reductase subunit B (EC 1.3.5.4) |
Fumarate reductase subunit B (EC 1.3.5.4) |
| frdC |
Gene: b4152: Fumarate reductase subunit C (EC 1.3.5.4) |
Gene: STM4341: Fumarate reductase subunit C (EC 1.3.5.4) |
Gene: CKO_03680: Fumarate reductase subunit C (EC 1.3.5.4) |
Gene: KPN_04551: Fumarate reductase subunit C (EC 1.3.5.4) |
Gene: Ent638_0341: Fumarate reductase subunit C (EC 1.3.5.4) |
|
Gene: y0615: Fumarate reductase subunit C (EC 1.3.5.4) |
Gene: Spro_0417: Fumarate reductase subunit C (EC 1.3.5.4) |
Gene: ECA3971: Fumarate reductase subunit C (EC 1.3.5.4) |
Gene: ETAE_0336: Fumarate reductase subunit C (EC 1.3.5.4) |
Gene: PMI3586: Fumarate reductase subunit C (EC 1.3.5.4) |
Gene: plu4126: Fumarate reductase subunit C (EC 1.3.5.4) |
Fumarate reductase subunit C (EC 1.3.5.4) |
| frdD |
Gene: b4151: Fumarate reductase subunit D (EC 1.3.5.4) |
Gene: STM4340: Fumarate reductase subunit D (EC 1.3.5.4) |
Gene: CKO_03681: Fumarate reductase subunit D (EC 1.3.5.4) |
Gene: KPN_04550: Fumarate reductase subunit D (EC 1.3.5.4) |
Gene: Ent638_0340: Fumarate reductase subunit D (EC 1.3.5.4) |
|
Gene: y0614: Fumarate reductase subunit D (EC 1.3.5.4) |
Gene: Spro_0416: Fumarate reductase subunit D (EC 1.3.5.4) |
Gene: ECA3972: Fumarate reductase subunit D (EC 1.3.5.4) |
Gene: ETAE_0335: Fumarate reductase subunit D (EC 1.3.5.4) |
Gene: PMI3585: Fumarate reductase subunit D (EC 1.3.5.4) |
Gene: plu4127: Fumarate reductase subunit D (EC 1.3.5.4) |
Fumarate reductase subunit D (EC 1.3.5.4) |
| CRON 11. | |||||||||||||
| caiT |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -122 score = 4.43145 sequence = TACCCATTATGAGTTA Gene: b0040: L-carnitine/gamma-butyrobetaine antiporter |
*
Salmonella typhimurium LT2 Site: position = -131 score = 4.07516 sequence = TACCCATCATGAGTTA Gene: STM0074: L-carnitine/gamma-butyrobetaine antiporter |
*
Citrobacter koseri ATCC BAA-895 Site: position = -130 score = 4.43145 sequence = TACCCATTATGAGTTA Gene: CKO_03343: L-carnitine/gamma-butyrobetaine antiporter |
|
|
|
|
|
|
Gene: ETAE_2664: L-carnitine/gamma-butyrobetaine antiporter |
Gene: PMI2654: L-carnitine/gamma-butyrobetaine antiporter |
|
L-carnitine/gamma-butyrobetaine antiporter |
| caiA |
Gene: b0039: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
Gene: STM0073: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
Gene: CKO_03344: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
|
|
|
|
|
|
Gene: ETAE_2663: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
Gene: PMI2655: Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
|
Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) |
| caiB |
Gene: b0038: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
Gene: STM0072: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
Gene: CKO_03345: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
|
|
|
|
|
|
Gene: ETAE_2662: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
Gene: PMI2656: Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
|
Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) |
| caiC |
Gene: b0037: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
Gene: STM0071: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
Gene: CKO_03346: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
|
|
|
|
|
|
Gene: ETAE_2661: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
Gene: PMI2657: Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
|
Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) |
| caiD |
Gene: b0036: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
Gene: STM0070: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
Gene: CKO_03347: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
|
|
|
|
|
|
Gene: ETAE_2660: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
Gene: PMI2658: Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
|
Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) |
| caiE |
Gene: b0035: Carnitine operon protein CaiE |
Gene: STM0069: Carnitine operon protein CaiE |
Gene: CKO_03348: Carnitine operon protein CaiE |
|
|
|
|
|
|
|
Gene: PMI2659: Carnitine operon protein CaiE |
|
Carnitine operon protein CaiE |
| CRON 12. | |||||||||||||
| modA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -90 score = 3.89346 sequence = TACCTCACAAAGGTTA Gene: b0763: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
*
Salmonella typhimurium LT2 Site: position = -91 score = 4.2171 sequence = TAATCGTTAATGGGTA Gene: STM0781: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -90 score = 3.99388 sequence = TAACCTCAATTGGGTA Gene: CKO_02372: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: KPN_00777: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Ent638_1254: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: EAM_1202: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: y3037: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: Spro_1303: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: ECA1393: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: ETAE_2559: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: PMI0597: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Gene: plu1476: Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
Molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1) |
| modB |
Gene: b0764: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: STM0782: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: CKO_02371: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: KPN_00778: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Ent638_1255: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: EAM_1203: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: y3036: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: Spro_1304: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: ECA1394: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: ETAE_2558: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: PMI0598: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Gene: plu1477: Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
Molybdenum ABC transporter, permease protein (TC 3.A.1.8.1) |
| modC |
Gene: b0765: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: STM0783: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: CKO_02370: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: KPN_00779: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Ent638_1256: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: EAM_1204: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: y3035: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: Spro_1305: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: ECA1395: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: ETAE_2557: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: PMI0599: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Gene: plu1478: Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
Molybdenum ABC transporter, ATP-binding protein (TC 3.A.1.8.1) |
| CRON 13. | |||||||||||||
| fixA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -365 score = 4.62936 sequence = TAACTCATAATGGGTA Gene: b0041: Flavoprotein involved in anaerobic carnitine metabolism |
*
Salmonella typhimurium LT2 Site: position = -365 score = 4.00436 sequence = TAACTCATGATGGGTA Gene: STM0075: Flavoprotein involved in anaerobic carnitine metabolism |
*
Citrobacter koseri ATCC BAA-895 Site: position = -330 score = 4.62936 sequence = TAACTCATAATGGGTA Gene: CKO_03341: Flavoprotein involved in anaerobic carnitine metabolism |
|
|
|
|
|
|
Gene: ETAE_2666: Flavoprotein involved in anaerobic carnitine metabolism |
Gene: PMI2653: Flavoprotein involved in anaerobic carnitine metabolism |
|
Flavoprotein involved in anaerobic carnitine metabolism |
| fixB |
Gene: b0042: Flavoprotein involved in anaerobic carnitine metabolism |
Gene: STM0076: Flavoprotein involved in anaerobic carnitine metabolism |
Gene: CKO_03340: Flavoprotein involved in anaerobic carnitine metabolism |
|
|
|
|
|
|
Gene: ETAE_2667: Flavoprotein involved in anaerobic carnitine metabolism |
Gene: PMI2652: Flavoprotein involved in anaerobic carnitine metabolism |
|
Flavoprotein involved in anaerobic carnitine metabolism |
| fixC |
Gene: b0043: Flavoprotein involved in anaerobic carnitine metabolism (EC 1.5.5.-) |
Gene: STM0077: Flavoprotein involved in anaerobic carnitine metabolism (EC 1.5.5.-) |
Gene: CKO_03339: Flavoprotein involved in anaerobic carnitine metabolism (EC 1.5.5.-) |
|
|
|
|
|
|
Gene: ETAE_2668: Flavoprotein involved in anaerobic carnitine metabolism (EC 1.5.5.-) |
Gene: PMI2651: Flavoprotein involved in anaerobic carnitine metabolism (EC 1.5.5.-) |
|
Flavoprotein involved in anaerobic carnitine metabolism (EC 1.5.5.-) |
| fixX |
Gene: b0044: Predicted ferredoxin involved in anaerobic carnitine metabolism |
Gene: STM0078: Predicted ferredoxin involved in anaerobic carnitine metabolism |
Gene: CKO_03338: Predicted ferredoxin involved in anaerobic carnitine metabolism |
|
|
|
|
|
|
Gene: ETAE_2669: Predicted ferredoxin involved in anaerobic carnitine metabolism |
Gene: PMI2650: Predicted ferredoxin involved in anaerobic carnitine metabolism |
|
Predicted ferredoxin involved in anaerobic carnitine metabolism |
| CRON 14. | |||||||||||||
| narK |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -236 score = 4.11752 sequence = TACCCGGAAAGAGTTA Gene: b1223: Nitrate/nitrite antiporter |
*
Salmonella typhimurium LT2 Site: position = -236 score = 4.23843 sequence = TACCTATAACGAGTTA Site: position = -126 score = 4.01027 sequence = TACTCATTAAGGGTAA Gene: STM1765: Nitrate/nitrite antiporter |
*
Citrobacter koseri ATCC BAA-895 Site: position = -392 score = 4.23843 sequence = TACCTATAACGAGTTA Site: position = -282 score = 4.51546 sequence = TACTCACTAAGGGGCA Gene: CKO_01299: Nitrate/nitrite antiporter |
Gene: KPN_02215: Nitrate/nitrite antiporter |
Gene: Ent638_2316: Nitrate/nitrite antiporter |
|
|
*
Serratia proteamaculans 568 Site: position = -240 score = 4.58051 sequence = TACCTCTAACGAAGTA Gene: Spro_2898: Nitrate/nitrite antiporter |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -246 score = 4.75026 sequence = TACCCACTAGTGAGTA Site: position = -135 score = 4.31664 sequence = TACTCATTAAGGAGTG Gene: ECA2030: Nitrate/nitrite antiporter |
|
*
Proteus mirabilis HI4320 Site: position = -237 score = 4.75066 sequence = TACTCCAAAGGGAGTA Gene: PMI3570: Nitrate/nitrite antiporter |
|
Nitrate/nitrite antiporter |
| narG |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -158 score = 4.32434 sequence = TTATCCTAAAGGGGTA Gene: b1224: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
*
Salmonella typhimurium LT2 Site: position = -159 score = 4.34833 sequence = TCCTCCCAAAGGAGTA Gene: STM1764: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -158 score = 4.63255 sequence = TCCTCCTTAAGGGGTA Gene: CKO_01301: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
Gene: KPN_02214: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
Gene: Ent638_2315: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
|
|
*
Serratia proteamaculans 568 Site: position = -193 score = 3.81136 sequence = TGATACTTTAGGGGTA Gene: Spro_2883: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -194 score = 4.28493 sequence = TAATTCTTTAGTGGTA Gene: ECA2031: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
|
Gene: PMI3571: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
|
Respiratory nitrate reductase, alpha chain (EC 1.7.99.4) |
| narH |
Gene: b1225: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
Gene: STM1763: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
Gene: CKO_01302: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
Gene: KPN_02213: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
Gene: Ent638_2314: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
|
|
Gene: Spro_2882: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
Gene: ECA2032: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
|
Gene: PMI3572: Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
|
Respiratory nitrate reductase, beta chain (EC 1.7.99.4) |
| narJ |
Gene: b1226: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
Gene: STM1762: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
Gene: CKO_01303: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
Gene: KPN_02212: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
Gene: Ent638_2313: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
|
|
Gene: Spro_2881: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
Gene: ECA2033: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
|
Gene: PMI3573: Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
|
Respiratory nitrate reductase, delta chain (EC 1.7.99.4) |
| narI |
Gene: b1227: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
Gene: STM1761: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
Gene: CKO_01304: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
Gene: KPN_02211: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
Gene: Ent638_2312: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
|
|
Gene: Spro_2880: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
Gene: ECA2034: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
|
Gene: PMI3574: Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
|
Respiratory nitrate reductase, gamma chain (EC 1.7.99.4) |
| CRON 15. | |||||||||||||
| talA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -22 score = 4.18157 sequence = TACTTTTCAAGGAGTA Gene: b2464: Transaldolase (EC 2.2.1.2) |
*
Salmonella typhimurium LT2 Site: position = -22 score = 4.18157 sequence = TACTTTTCAAGGAGTA Gene: STM2473: Transaldolase (EC 2.2.1.2) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -22 score = 4.18157 sequence = TACTTTTCAAGGAGTA Gene: CKO_00330: Transaldolase (EC 2.2.1.2) |
Gene: KPN_02798: Transaldolase (EC 2.2.1.2) |
Gene: Ent638_2959: Transaldolase (EC 2.2.1.2) |
Gene: EAM_2407: Transaldolase (EC 2.2.1.2) |
|
Gene: Spro_3479: Transaldolase (EC 2.2.1.2) |
Gene: ECA0862: Transaldolase (EC 2.2.1.2) |
|
|
|
Transaldolase (EC 2.2.1.2) |
| tktB |
Gene: b2465: Transketolase (EC 2.2.1.1) |
Gene: STM2474: Transketolase (EC 2.2.1.1) |
Gene: CKO_00329: Transketolase (EC 2.2.1.1) |
Gene: KPN_02799: Transketolase (EC 2.2.1.1) |
Gene: Ent638_2960: Transketolase (EC 2.2.1.1) |
Gene: EAM_2408: Transketolase (EC 2.2.1.1) |
|
Gene: Spro_3480: Transketolase (EC 2.2.1.1) |
Gene: ECA0861: Transketolase (EC 2.2.1.1) |
|
|
|
Transketolase (EC 2.2.1.1) |
| CRON 16. | |||||||||||||
| ynfE |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -92 score = 4.67593 sequence = TAACCCAAAATGGGTA Gene: b1587: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
*
Salmonella typhimurium LT2 Site: position = -95 score = 4.99061 sequence = TACTCCCAAAGGGGTA Gene: STM1499: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -20 score = 3.8429 sequence = TAACTATAATGGAGTG Site: position = -93 score = 4.7616 sequence = TACCTATAAGGGGTTA Gene: CKO_01581: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
Gene: KPN_01580: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
|
|
|
|
|
|
|
|
Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
| ynfF |
Gene: b1588: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
Gene: STM1498: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
Gene: CKO_01582: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
|
|
|
|
|
|
|
|
|
Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
| ynfG |
Gene: b1589: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
Gene: STM1497: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
Gene: CKO_01583: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
Gene: KPN_01579: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
|
|
|
|
|
|
|
|
Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
| ynfH |
Gene: b1590: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
Gene: STM1496: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
Gene: CKO_01584: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
Gene: KPN_01578: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
|
|
|
|
|
|
|
|
Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
| dmsD |
Gene: b1591: Dimethyl sulfoxide reductase chaperone protein dmsD |
Gene: STM1495: Dimethyl sulfoxide reductase chaperone protein dmsD |
Gene: CKO_01585: Dimethyl sulfoxide reductase chaperone protein dmsD |
Gene: KPN_01577: Dimethyl sulfoxide reductase chaperone protein dmsD |
Gene: Ent638_1925: Dimethyl sulfoxide reductase chaperone protein dmsD |
|
Gene: y0867: Dimethyl sulfoxide reductase chaperone protein dmsD |
Gene: Spro_1690: Dimethyl sulfoxide reductase chaperone protein dmsD |
|
Gene: ETAE_2191: Dimethyl sulfoxide reductase chaperone protein dmsD |
|
|
Dimethyl sulfoxide reductase chaperone protein dmsD |
| dmsA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -180 score = 3.40268 sequence = TACCGAACAATAATTA Gene: b0894: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
*
Salmonella typhimurium LT2 Site: position = -161 score = 4.56068 sequence = TACCCTATTAGGGGTA Gene: STM0964: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -166 score = 5.2012 sequence = TACCCCTTTGGGGGTA Gene: CKO_02177: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
Gene: KPN_00926: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
Gene: Ent638_1418: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
|
Gene: y0864: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
*
Serratia proteamaculans 568 Site: position = -143 score = 4.32351 sequence = TACCCACTTCTGAGTA Gene: Spro_1687: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
|
Gene: ETAE_2194: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
|
|
Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-) |
| dmsB |
Gene: b0895: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
Gene: STM0965: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
|
Gene: KPN_00927: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
Gene: Ent638_1419: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
|
Gene: y0865: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
Gene: Spro_1688: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
|
Gene: ETAE_2193: Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
|
|
Dimethyl sulfoxide reductase, chain B (EC 1.8.99.-) |
| dmsC |
Gene: b0896: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
Gene: STM0966: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
|
Gene: KPN_00928: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
Gene: Ent638_1420: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
|
Gene: y0866: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
Gene: Spro_1689: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
|
Gene: ETAE_2192: Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
|
|
Dimethyl sulfoxide reductase, chain C (EC 1.8.99.-) |
| CRON 17. | |||||||||||||
| adhE |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -215 score = 4.73603 sequence = TACCCAGAAGTGAGTA Gene: b1241: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Salmonella typhimurium LT2 Site: position = -216 score = 4.57358 sequence = TACTCAGAAGTGAGTA Gene: STM1749: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -216 score = 4.57358 sequence = TACTCAGAAGTGAGTA Gene: CKO_01318: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: KPN_02199: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: Ent638_2304: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: EAM_1900: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Yersinia pestis KIM Site: position = -260 score = 3.96914 sequence = TACCTAAGAATAGTTA Gene: y2023: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Serratia proteamaculans 568 Site: position = -252 score = 3.95324 sequence = TACCCAAGAGTAGTTA Gene: Spro_2704: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -289 score = 4.04569 sequence = CACCCACAAATAGGTA Gene: ECA2326: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
*
Edwardsiella tarda EIB202 Site: position = -239 score = 4.39123 sequence = TACCCAAGAATGAGTA Gene: ETAE_1508: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: PMI1486: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Gene: plu2496: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
| CRON 18. | |||||||||||||
| yeaR |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -97 score = 3.7323 sequence = TAACCAATAAATGGTA Gene: b1797: Conserved hypothetical protein |
*
Salmonella typhimurium LT2 Site: position = -99 score = 3.7323 sequence = TAACCAATAAATGGTA Gene: STM1271: Conserved hypothetical protein |
*
Citrobacter koseri ATCC BAA-895 Site: position = -234 score = 3.7323 sequence = TAACCAATAAATGGTA Gene: CKO_01824: Conserved hypothetical protein |
Gene: KPN_02454: Conserved hypothetical protein |
Gene: Ent638_2121: Conserved hypothetical protein |
|
|
|
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -170 score = 4.2231 sequence = TAACCACAATTGAGTA Gene: ECA1474: Conserved hypothetical protein |
|
Gene: PMI0798: Conserved hypothetical protein |
|
Conserved hypothetical protein |
| yoaG |
Gene: b1796: Conserved hypothetical protein |
Gene: STM1272: Conserved hypothetical protein |
Gene: CKO_01823: Conserved hypothetical protein |
Gene: KPN_02453: Conserved hypothetical protein |
Gene: Ent638_2123: Conserved hypothetical protein |
|
|
|
Gene: ECA1472: Conserved hypothetical protein |
|
Gene: PMI0797: Conserved hypothetical protein |
|
Conserved hypothetical protein |
| CRON 19. | |||||||||||||
| ompW |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -55 score = 4.54011 sequence = TACTCCAATGTAGGTA Gene: b1256: Outer membrane protein W precursor |
*
Salmonella typhimurium LT2 Site: position = -55 score = 4.65131 sequence = TACTTCATTGTGGGTA Gene: STM1732: Outer membrane protein W precursor |
*
Citrobacter koseri ATCC BAA-895 Site: position = -55 score = 4.54011 sequence = TACTCCATTGTAGGTA Gene: CKO_01333: Outer membrane protein W precursor |
Gene: KPN_01248: Outer membrane protein W precursor |
Gene: Ent638_2283: Outer membrane protein W precursor |
Gene: EAM_1884: Outer membrane protein W precursor |
*
Yersinia pestis KIM Site: position = -43 score = 4.65292 sequence = TACTCATTTGTAGGTA Gene: y2044: Outer membrane protein W precursor |
*
Serratia proteamaculans 568 Site: position = -28 score = 4.46754 sequence = TACCCGTAAGTAGGTA Gene: Spro_2674: Outer membrane protein W precursor |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -56 score = 4.92082 sequence = TACCTACTTAGGGGTA Gene: ECA2303: Outer membrane protein W precursor |
*
Edwardsiella tarda EIB202 Site: position = -52 score = 3.70799 sequence = TCACTCAATATGGTTA Gene: ETAE_1528: Outer membrane protein W precursor |
*
Proteus mirabilis HI4320 Site: position = -59 score = 4.88793 sequence = TACTTATTAATGGGTA Gene: PMI1350: Outer membrane protein W precursor |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -55 score = 3.84691 sequence = TTCTAATATATGAGTA Gene: plu2478: Outer membrane protein W precursor |
Outer membrane protein W precursor |
| CRON 20. | |||||||||||||
| nrfA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -175 score = 4.50872 sequence = TAACTCTAAAGTGGTA Gene: b4070: Nitrite reductase, cytochrome c(552) |
*
Salmonella typhimurium LT2 Site: position = -177 score = 4.50872 sequence = TAACTCTAAAGTGGTA Gene: STM4277: Nitrite reductase, cytochrome c(552) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -180 score = 4.50872 sequence = TAACTCTAAAGTGGTA Gene: CKO_03814: Nitrite reductase, cytochrome c(552) |
|
|
|
|
|
Gene: ECA1875: Nitrite reductase, cytochrome c(552) |
Gene: ETAE_2795: Nitrite reductase, cytochrome c(552) |
|
|
Nitrite reductase, cytochrome c(552) |
| nrfB |
Gene: b4071: Cytochrome c-type protein NrfB precursor |
Gene: STM4278.S: Cytochrome c-type protein NrfB precursor |
Gene: CKO_03812: Cytochrome c-type protein NrfB precursor |
|
|
|
|
|
Gene: ECA1876: Cytochrome c-type protein NrfB precursor |
Gene: ETAE_2794: Cytochrome c-type protein NrfB precursor |
|
|
Cytochrome c-type protein NrfB precursor |
| nrfC |
Gene: b4072: Nitrite reductase, Fe-S center subunit |
Gene: STM4279: Nitrite reductase, Fe-S center subunit |
Gene: CKO_03811: Nitrite reductase, Fe-S center subunit |
|
|
|
|
|
Gene: ECA1877: Nitrite reductase, Fe-S center subunit |
Gene: ETAE_2793: Nitrite reductase, Fe-S center subunit |
|
|
Nitrite reductase, Fe-S center subunit |
| nrfD |
Gene: b4073: Nitrite reductase, NrfD component |
Gene: STM4280: Nitrite reductase, NrfD component |
Gene: CKO_03810: Nitrite reductase, NrfD component |
|
|
|
|
|
Gene: ECA1878: Nitrite reductase, NrfD component |
Gene: ETAE_2792: Nitrite reductase, NrfD component |
|
|
Nitrite reductase, NrfD component |
| nrfE |
Gene: b4074: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
Gene: STM4281: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
Gene: CKO_03809: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
|
|
|
|
|
Gene: ECA1879: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
Gene: ETAE_2791: Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
|
|
Nitrite reductase, cytochrome c-type heme lyase subunit nrfE |
| nrfF |
Gene: b4075: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF |
|
Gene: CKO_03808: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF |
|
|
|
|
|
Gene: ECA1880: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF |
Gene: ETAE_2790: Nitrite reductase, cytochrome c-type heme lyase subunit nrfF |
|
|
Nitrite reductase, cytochrome c-type heme lyase subunit nrfF |
| nrfG |
Gene: b4076: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
Gene: STM4282: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
Gene: CKO_03807: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
|
|
|
|
|
Gene: ECA1881: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
Gene: ETAE_2789: Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
|
|
Nitrite reductase, cytochrome c-type heme lyase subunit nrfG |
| CRON 21. | |||||||||||||
| napF |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -129 score = 4.64962 sequence = TACCCCGATCGGGGTA Gene: b2208: Periplasmic nitrate reductase, ferredoxin-type protein NapF |
*
Salmonella typhimurium LT2 Site: position = -132 score = 4.78922 sequence = TACCTCTATCGGGGTA Gene: STM2261: Periplasmic nitrate reductase, ferredoxin-type protein NapF |
|
|
|
|
*
Yersinia pestis KIM Site: position = -158 score = 4.33804 sequence = TACTCATTATTCGGTA Gene: y1442: Periplasmic nitrate reductase, ferredoxin-type protein NapF |
*
Serratia proteamaculans 568 Site: position = -322 score = 4.67523 sequence = TACCCCTTTAGGGGGA Gene: Spro_3488: Periplasmic nitrate reductase, ferredoxin-type protein NapF |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -111 score = 4.35996 sequence = TACCTCTAAAGGGTGA Gene: ECA1898: Periplasmic nitrate reductase, ferredoxin-type protein NapF |
*
Edwardsiella tarda EIB202 Site: position = -156 score = 3.92397 sequence = TAACCCAAAAGAGGAA Gene: ETAE_1114: Periplasmic nitrate reductase, ferredoxin-type protein NapF |
|
|
Periplasmic nitrate reductase, ferredoxin-type protein NapF |
| napD |
Gene: b2207: Periplasmic nitrate reductase component NapD |
Gene: STM2260: Periplasmic nitrate reductase component NapD |
*
Citrobacter koseri ATCC BAA-895 Site: position = -612 score = 4.59865 sequence = TACCCCAATCGGGGTA Gene: CKO_00568: Periplasmic nitrate reductase component NapD |
|
|
|
Gene: y1443: Periplasmic nitrate reductase component NapD |
Gene: Spro_3487: Periplasmic nitrate reductase component NapD |
Gene: ECA1897: Periplasmic nitrate reductase component NapD |
Gene: ETAE_1115: Periplasmic nitrate reductase component NapD |
|
|
Periplasmic nitrate reductase component NapD |
| napA |
Gene: b2206: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: STM2259: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: CKO_00569: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
|
|
|
Gene: Spro_3486: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: ECA1896: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
Gene: ETAE_1116: Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
|
|
Periplasmic nitrate reductase precursor (EC 1.7.99.4) |
| napG |
Gene: b2205: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: STM2258: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: CKO_00570: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
|
|
|
|
|
Gene: ECA1895: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
Gene: ETAE_1117: Periplasmic nitrate reductase, ferredoxin-type protein NapG |
|
|
Periplasmic nitrate reductase, ferredoxin-type protein NapG |
| napH |
Gene: b2204: Periplasmic nitrate reductase, polyferredoxin NapH |
Gene: STM2257: Periplasmic nitrate reductase, polyferredoxin NapH |
Gene: CKO_00571: Periplasmic nitrate reductase, polyferredoxin NapH |
|
|
|
|
|
Gene: ECA1894: Periplasmic nitrate reductase, polyferredoxin NapH |
Gene: ETAE_1118: Periplasmic nitrate reductase, polyferredoxin NapH |
|
|
Periplasmic nitrate reductase, polyferredoxin NapH |
| napB |
Gene: b2203: Nitrate reductase cytochrome c550-type subunit |
Gene: STM2256: Nitrate reductase cytochrome c550-type subunit |
Gene: CKO_00572: Nitrate reductase cytochrome c550-type subunit |
|
|
|
Gene: y1446: Nitrate reductase cytochrome c550-type subunit |
Gene: Spro_3485: Nitrate reductase cytochrome c550-type subunit |
Gene: ECA1893: Nitrate reductase cytochrome c550-type subunit |
Gene: ETAE_1119: Nitrate reductase cytochrome c550-type subunit |
|
|
Nitrate reductase cytochrome c550-type subunit |
| napC |
Gene: b2202: Cytochrome c-type protein NapC |
Gene: STM2255: Cytochrome c-type protein NapC |
Gene: CKO_00573: Cytochrome c-type protein NapC |
|
|
|
Gene: y1447: Cytochrome c-type protein NapC |
Gene: Spro_3484: Cytochrome c-type protein NapC |
Gene: ECA1892: Cytochrome c-type protein NapC |
Gene: ETAE_1120: Cytochrome c-type protein NapC |
|
|
Cytochrome c-type protein NapC |
| ccmA |
Gene: b2201: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
2
Salmonella typhimurium LT2 Gene: STM2254: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA Gene: STM3819: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
Gene: CKO_00574: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
Gene: KPN_02081: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
|
Gene: EAM_2358: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
*
Yersinia pestis KIM Site: position = -112 score = 4.75559 sequence = TACCTCTATAAGGGTA Gene: y1567: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
*
Serratia proteamaculans 568 Site: position = -49 score = 4.86997 sequence = TACCCCTATTGGAGTA Gene: Spro_3391: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -86 score = 4.62542 sequence = TAACCCTTTAGGGTTA Gene: ECA1882: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
*
Edwardsiella tarda EIB202 Site: position = -64 score = 4.36962 sequence = TACCCCGAATGAGTTA Gene: ETAE_2461: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
|
|
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA |
| ccmB |
Gene: b2200: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
2
Salmonella typhimurium LT2 Gene: STM3818: ABC transporter involved in cytochrome c biogenesis, CcmB subunit Gene: STM2253: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: CKO_00575: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: KPN_02080: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
|
Gene: EAM_2357: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: y1568: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: Spro_3390: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: ECA1883: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
Gene: ETAE_2460: ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
|
|
ABC transporter involved in cytochrome c biogenesis, CcmB subunit |
| ccmC |
Gene: b2199: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
2
Salmonella typhimurium LT2 Gene: STM2252: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE Gene: STM3817: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: CKO_00577: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: KPN_02079: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
|
Gene: EAM_2356: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: y1569: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: Spro_3389: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: ECA1884: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
Gene: ETAE_2459: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
|
|
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE |
| ccmD |
Gene: b2198: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
2
Salmonella typhimurium LT2 Gene: STM2251: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE Gene: STM3816: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: CKO_00578: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: KPN_02078: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
|
Gene: EAM_2355: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: y1570: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: Spro_3388: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: ECA1885: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
Gene: ETAE_2458: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
|
|
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE |
| ccmE |
Gene: b2197: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
2
Salmonella typhimurium LT2 Gene: STM2250: Cytochrome c-type biogenesis protein CcmE, heme chaperone Gene: STM3815: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: CKO_00579: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: KPN_02077: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
|
Gene: EAM_2354: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: y1571: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: Spro_3387: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: ECA1886: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
Gene: ETAE_2457: Cytochrome c-type biogenesis protein CcmE, heme chaperone |
|
|
Cytochrome c-type biogenesis protein CcmE, heme chaperone |
| ccmF |
Gene: b2196: Cytochrome c heme lyase, subunit CcmF |
2
Salmonella typhimurium LT2 Gene: STM2249: Cytochrome c heme lyase, subunit CcmF Gene: STM3814: Cytochrome c heme lyase, subunit CcmF |
Gene: CKO_00581: Cytochrome c heme lyase, subunit CcmF |
Gene: KPN_02076: Cytochrome c heme lyase, subunit CcmF |
|
Gene: EAM_2353: Cytochrome c heme lyase, subunit CcmF |
Gene: y1572: Cytochrome c heme lyase, subunit CcmF |
Gene: Spro_3386: Cytochrome c heme lyase, subunit CcmF |
Gene: ECA1887: Cytochrome c heme lyase, subunit CcmF |
Gene: ETAE_2456: Cytochrome c heme lyase, subunit CcmF |
|
|
Cytochrome c heme lyase, subunit CcmF |
| ccmG |
Gene: b2195: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
2
Salmonella typhimurium LT2 Gene: STM2248: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Gene: STM3813: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: CKO_00582: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: KPN_02075: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
|
Gene: EAM_2352: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: y1573: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: Spro_3385: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: ECA1888: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
Gene: ETAE_2455: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
|
|
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase |
| ccmH |
Gene: b2194: Cytochrome c heme lyase, subunit CcmH |
2
Salmonella typhimurium LT2 Gene: STM2247: Cytochrome c heme lyase, subunit CcmH Gene: STM3812: Cytochrome c heme lyase, subunit CcmH |
Gene: CKO_00583: Cytochrome c heme lyase, subunit CcmH |
2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_02073: Cytochrome c heme lyase, subunit CcmH Gene: KPN_02074: Cytochrome c heme lyase, subunit CcmH |
|
2
Erwinia amylovora ATCC 49946 Gene: EAM_2351: Cytochrome c heme lyase, subunit CcmH Gene: EAM_2350: Cytochrome c heme lyase, subunit CcmH |
2
Yersinia pestis KIM Gene: y1574: Cytochrome c heme lyase, subunit CcmH Gene: y1575: Cytochrome c heme lyase, subunit CcmH |
2
Serratia proteamaculans 568 Gene: Spro_3384: Cytochrome c heme lyase, subunit CcmH Gene: Spro_3383: Cytochrome c heme lyase, subunit CcmH |
2
Erwinia carotovora subsp. atroseptica SCRI1043 Gene: ECA1889: Cytochrome c heme lyase, subunit CcmH Gene: ECA1890: Cytochrome c heme lyase, subunit CcmH |
2
Edwardsiella tarda EIB202 Gene: ETAE_2454: Cytochrome c heme lyase, subunit CcmH Gene: ETAE_2453: Cytochrome c heme lyase, subunit CcmH |
|
|
Cytochrome c heme lyase, subunit CcmH |
| CRON 22. | |||||||||||||
| norV |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -118 score = 4.58368 sequence = TACTCATTAATGGGCA Gene: b2710: Nitric oxide reductase, flavorubredoxin (EC 1.18.1.-) |
Gene: STM2840: Nitric oxide reductase, flavorubredoxin (EC 1.18.1.-) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -118 score = 4.19786 sequence = TACCATTTTATGAGTA Gene: CKO_04064: Nitric oxide reductase, flavorubredoxin (EC 1.18.1.-) |
Gene: KPN_03045: Nitric oxide reductase, flavorubredoxin (EC 1.18.1.-) |
Gene: Ent638_3182: Nitric oxide reductase, flavorubredoxin (EC 1.18.1.-) |
|
|
Gene: Spro_3033: Nitric oxide reductase, flavorubredoxin (EC 1.18.1.-) |
Gene: ECA0902: Nitric oxide reductase, flavorubredoxin (EC 1.18.1.-) |
|
|
|
Nitric oxide reductase, flavorubredoxin (EC 1.18.1.-) |
| norW |
Gene: b2711: Nitric oxide reductase reductase, FlRd-NAD dependent (EC 1.18.1.-) |
Gene: STM2841: Nitric oxide reductase reductase, FlRd-NAD dependent (EC 1.18.1.-) |
Gene: CKO_04065: Nitric oxide reductase reductase, FlRd-NAD dependent (EC 1.18.1.-) |
Gene: KPN_03046: Nitric oxide reductase reductase, FlRd-NAD dependent (EC 1.18.1.-) |
Gene: Ent638_3183: Nitric oxide reductase reductase, FlRd-NAD dependent (EC 1.18.1.-) |
|
|
Gene: Spro_3034: Nitric oxide reductase reductase, FlRd-NAD dependent (EC 1.18.1.-) |
Gene: ECA0901: Nitric oxide reductase reductase, FlRd-NAD dependent (EC 1.18.1.-) |
|
|
|
Nitric oxide reductase reductase, FlRd-NAD dependent (EC 1.18.1.-) |
| CRON 23. | |||||||||||||
| narQ |
Gene: b2469: Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-) |
Gene: STM2480: Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-) |
Gene: CKO_00321: Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-) |
|
|
|
|
*
Serratia proteamaculans 568 Site: position = -243 score = 4.795 sequence = TCCCCCTAAAGGGGTA Gene: Spro_3489: Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -257 score = 4.26769 sequence = TCACCCTTTAGAGGTA Gene: ECA1900: Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-) |
*
Edwardsiella tarda EIB202 Site: position = -169 score = 4.07565 sequence = TTCCTCTTTTGGGTTA Gene: ETAE_1112: Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-) |
|
|
Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-) |
| narP |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -91 score = 3.97234 sequence = TACATAAAATGGGGTA Gene: b2193: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: STM2246: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: CKO_00584: Nitrate/nitrite response regulator protein NarP, LuxR family |
|
|
|
Gene: y1441: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: Spro_3490: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: ECA1901: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: ETAE_1111: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: PMI1553: Nitrate/nitrite response regulator protein NarP, LuxR family |
Gene: plu2720: Nitrate/nitrite response regulator protein NarP, LuxR family |
Nitrate/nitrite response regulator protein NarP, LuxR family |
| CRON 24. | |||||||||||||
| nirB |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -101 score = 5.08839 sequence = TACCCATTAAGGAGTA Gene: b3365: Nitrite reductase large subunit (EC 1.7.1.4) |
*
Salmonella typhimurium LT2 Site: position = -101 score = 5.0429 sequence = TACCCATTAAGAGGTA Gene: STM3474: Nitrite reductase large subunit (EC 1.7.1.4) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -101 score = 5.16615 sequence = TACCTCTTAAGGAGTA Gene: CKO_04789: Nitrite reductase large subunit (EC 1.7.1.4) |
Gene: KPN_03752: Nitrite reductase large subunit (EC 1.7.1.4) |
Gene: Ent638_3793: Nitrite reductase large subunit (EC 1.7.1.4) |
|
*
Yersinia pestis KIM Site: position = -100 score = 4.54999 sequence = TACCACCTTAGAGGTA Gene: y3945: Nitrite reductase large subunit (EC 1.7.1.4) |
*
Serratia proteamaculans 568 Site: position = -197 score = 4.53059 sequence = TACTCCCGAATGGGTA Site: position = -101 score = 4.48479 sequence = TACCACATTAGAGGTA Gene: Spro_4595: Nitrite reductase large subunit (EC 1.7.1.4) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -100 score = 4.75868 sequence = TACCCACAAAGAAGTA Gene: ECA4079: Nitrite reductase large subunit (EC 1.7.1.4) |
|
*
Proteus mirabilis HI4320 Site: position = -134 score = 4.08099 sequence = TACTACTTTGGTAGTA Gene: PMI1479: Nitrite reductase large subunit (EC 1.7.1.4) |
|
Nitrite reductase large subunit (EC 1.7.1.4) |
| nirD |
Gene: b3366: Nitrite reductase small subunit (EC 1.7.1.4) |
Gene: STM3475: Nitrite reductase small subunit (EC 1.7.1.4) |
Gene: CKO_04790: Nitrite reductase small subunit (EC 1.7.1.4) |
Gene: KPN_03753: Nitrite reductase small subunit (EC 1.7.1.4) |
Gene: Ent638_3794: Nitrite reductase small subunit (EC 1.7.1.4) |
|
Gene: y3944: Nitrite reductase small subunit (EC 1.7.1.4) |
Gene: Spro_4596: Nitrite reductase small subunit (EC 1.7.1.4) |
Gene: ECA4080: Nitrite reductase small subunit (EC 1.7.1.4) |
|
Gene: PMI1478: Nitrite reductase small subunit (EC 1.7.1.4) |
|
Nitrite reductase small subunit (EC 1.7.1.4) |
| nirC |
Gene: b3367: Nitrite transporter, FNT family |
Gene: STM3476: Nitrite transporter, FNT family |
Gene: CKO_04791: Nitrite transporter, FNT family |
|
Gene: Ent638_3795: Nitrite transporter, FNT family |
|
Gene: y3942: Nitrite transporter, FNT family |
Gene: Spro_4597: Nitrite transporter, FNT family |
|
|
|
|
Nitrite transporter, FNT family |
| cysG |
Gene: b3368: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: STM3477: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: CKO_04792: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: KPN_03754: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: Ent638_3796: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
|
Gene: y3941: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: Spro_4598: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
Gene: ECA4081: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
|
Gene: PMI1477: Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
|
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) |
| CRON 25. | |||||||||||||
| ydhY |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -163 score = 4.45014 sequence = TAACCATAAAGGATTA Gene: b1674: Predicted oxidoreductase, FeS cluster subunit |
|
*
Citrobacter koseri ATCC BAA-895 Site: position = -111 score = 4.4041 sequence = TAACTCTTTGGGATTA Gene: CKO_01699: Predicted oxidoreductase, FeS cluster subunit |
|
|
|
|
|
|
|
Gene: PMI0070: Predicted oxidoreductase, FeS cluster subunit |
|
Predicted oxidoreductase, FeS cluster subunit |
| ydhV |
Gene: b1673: Predicted oxidoreductase subunit |
|
Gene: CKO_01698: Predicted oxidoreductase subunit |
|
|
|
|
|
|
|
Gene: PMI0069: Predicted oxidoreductase subunit |
|
Predicted oxidoreductase subunit |
| ydhW |
Gene: b1672: Predicted oxidoreductase subunit |
|
Gene: CKO_01697: Predicted oxidoreductase subunit |
|
|
|
|
|
|
|
Gene: PMI0068: Predicted oxidoreductase subunit |
|
Predicted oxidoreductase subunit |
| ydhX |
Gene: b1671: Predicted oxidoreductase, FeS cluster subunit |
|
Gene: CKO_01696: Predicted oxidoreductase, FeS cluster subunit |
|
|
|
|
|
|
|
Gene: PMI0067: Predicted oxidoreductase, FeS cluster subunit |
|
Predicted oxidoreductase, FeS cluster subunit |
| ydhU |
Gene: b1670: Predicted oxidoreductase, cytochrome b subunit |
|
Gene: CKO_01695: Predicted oxidoreductase, cytochrome b subunit |
|
|
|
|
|
|
|
Gene: PMI0066: Predicted oxidoreductase, cytochrome b subunit |
|
Predicted oxidoreductase, cytochrome b subunit |
| ydhT |
Gene: b1669: Predicted oxidoreductase subunit |
|
Gene: CKO_01694: Predicted oxidoreductase subunit |
|
|
|
|
|
|
|
Gene: PMI0065: Predicted oxidoreductase subunit |
|
Predicted oxidoreductase subunit |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |