Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NarP in Edwardsiella tarda EIB202

Properties
Regulator type: Transcription factor
TF locus tag: ETAE_1111
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrate; Nitrite
Regulog: NarP - Enterobacteriales
Statistics of regulated genes:
- Genes 29
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 125 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -169
Score: 4.1
Sequence: TTCCTCTTTTGGGTTA
Locus tag: ETAE_1112
Name: narQ
Funciton: Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-)
Locus tag: ETAE_1111
Name: narP
Funciton: Nitrate/nitrite response regulator protein NarP, LuxR family
ETAE_1112
narQ
Nitrate/nitrite sensor kinase NarQ (EC 2.7.3.-)
ETAE_1111
narP
Nitrate/nitrite response regulator protein NarP, LuxR family
Position: -64
Score: 4.4
Sequence: TACCCCGAATGAGTTA
Locus tag: ETAE_2461
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: ETAE_2460
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: ETAE_2459
Name: ccmC
Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: ETAE_2458
Name: ccmD
Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: ETAE_2457
Name: ccmE
Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: ETAE_2456
Name: ccmF
Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: ETAE_2455
Name: ccmG
Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: ETAE_2454
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: ETAE_2453
Name: ccmH
Funciton: Cytochrome c heme lyase, subunit CcmH
ETAE_2461
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ETAE_2460
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ETAE_2459
ccmC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
ETAE_2458
ccmD
Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
ETAE_2457
ccmE
Cytochrome c-type biogenesis protein CcmE, heme chaperone
ETAE_2456
ccmF
Cytochrome c heme lyase, subunit CcmF
ETAE_2455
ccmG
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
ETAE_2454
ccmH
Cytochrome c heme lyase, subunit CcmH
ETAE_2453
ccmH
Cytochrome c heme lyase, subunit CcmH
Position: -156
Score: 3.9
Sequence: TAACCCAAAAGAGGAA
Locus tag: ETAE_1114
Name: napF
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Locus tag: ETAE_1115
Name: napD
Funciton: Periplasmic nitrate reductase component NapD
Locus tag: ETAE_1116
Name: napA
Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: ETAE_1117
Name: napG
Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: ETAE_1118
Name: napH
Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: ETAE_1119
Name: napB
Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: ETAE_1120
Name: napC
Funciton: Cytochrome c-type protein NapC
ETAE_1114
napF
Periplasmic nitrate reductase, ferredoxin-type protein NapF
ETAE_1115
napD
Periplasmic nitrate reductase component NapD
ETAE_1116
napA
Periplasmic nitrate reductase precursor (EC 1.7.99.4)
ETAE_1117
napG
Periplasmic nitrate reductase, ferredoxin-type protein NapG
ETAE_1118
napH
Periplasmic nitrate reductase, polyferredoxin NapH
ETAE_1119
napB
Nitrate reductase cytochrome c550-type subunit
ETAE_1120
napC
Cytochrome c-type protein NapC
Position: -52
Score: 3.7
Sequence: TCACTCAATATGGTTA
Locus tag: ETAE_1528
Name: ompW
Funciton: Outer membrane protein W precursor
ETAE_1528
ompW
Outer membrane protein W precursor
Position: -239
Score: 4.4
Sequence: TACCCAAGAATGAGTA
Locus tag: ETAE_1508
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
ETAE_1508
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Position: -156
Score: 4.4
Sequence: TACCTCCTGGGGGGTA
Locus tag: ETAE_3526
Name: atpI
Funciton: ATP synthase maturation
Locus tag: ETAE_3527
Name: atpB
Funciton: ATP synthase, F0 complex, A chain (EC 3.6.3.14)
Locus tag: ETAE_3528
Name: atpE
Funciton: ATP synthase, F0 complex, C chain (EC 3.6.3.14)
Locus tag: ETAE_3529
Name: atpF
Funciton: ATP synthase, F0 complex, B chain (EC 3.6.3.14)
Locus tag: ETAE_3530
Name: atpH
Funciton: ATP synthase, F1 complex, delta chain (EC 3.6.3.14)
Locus tag: ETAE_3531
Name: atpA
Funciton: ATP synthase, F1 complex, alpha chain (EC 3.6.3.14)
Locus tag: ETAE_3532
Name: atpG
Funciton: ATP synthase, F1 complex, gamma chain (EC 3.6.3.14)
Locus tag: ETAE_3533
Name: atpD
Funciton: ATP synthase, F1 complex, beta chain (EC 3.6.3.14)
Locus tag: ETAE_3534
Name: atpC
Funciton: ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14)
ETAE_3526
atpI
ATP synthase maturation
ETAE_3527
atpB
ATP synthase, F0 complex, A chain (EC 3.6.3.14)
ETAE_3528
atpE
ATP synthase, F0 complex, C chain (EC 3.6.3.14)
ETAE_3529
atpF
ATP synthase, F0 complex, B chain (EC 3.6.3.14)
ETAE_3530
atpH
ATP synthase, F1 complex, delta chain (EC 3.6.3.14)
ETAE_3531
atpA
ATP synthase, F1 complex, alpha chain (EC 3.6.3.14)
ETAE_3532
atpG
ATP synthase, F1 complex, gamma chain (EC 3.6.3.14)
ETAE_3533
atpD
ATP synthase, F1 complex, beta chain (EC 3.6.3.14)
ETAE_3534
atpC
ATP synthase, F1 complex, epsilon chain (EC 3.6.3.14)
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