Regulog FadR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | activator (repressor) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - FadR
- By TF family - GntR/Others
- By effector - Palmitoyl-CoA
- By effector - Oleoyl-CoA
- By pathway - Fatty acid degradation
| Genome | Genes | Operons |
|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | 14 | 12 |
| Salmonella typhimurium LT2 | 14 | 12 |
| Citrobacter koseri ATCC BAA-895 | 13 | 11 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 14 | 12 |
| Enterobacter sp. 638 | 14 | 12 |
| Erwinia amylovora ATCC 49946 | 8 | 7 |
| Yersinia pestis KIM | 13 | 11 |
| Serratia proteamaculans 568 | 13 | 11 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 11 | 9 |
| Edwardsiella tarda EIB202 | 4 | 4 |
| Proteus mirabilis HI4320 | 11 | 9 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 13 | 11 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| fadE |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -38 score = 4.52809 sequence = AAGTGGTCAGACCTCCT Gene: b0221: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
*
Salmonella typhimurium LT2 Site: position = -39 score = 4.52809 sequence = AAGTGGTCAGACCTCCT Gene: STM0309: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -39 score = 4.52809 sequence = AAGTGGTCAGACCTCCT Gene: CKO_02965: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -40 score = 4.52809 sequence = AAGTGGTCAGACCTCCT Gene: KPN_00235: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
*
Enterobacter sp. 638 Site: position = -39 score = 4.52809 sequence = AAGTGGTCAGACCTCCT Gene: Ent638_0758: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
*
Erwinia amylovora ATCC 49946 Site: position = -38 score = 5.14353 sequence = AACAGGTCCGACCACTT Gene: EAM_0890: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
*
Yersinia pestis KIM Site: position = -36 score = 4.6873 sequence = AACAGGTCAGACCTCCT Gene: y0946: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
*
Serratia proteamaculans 568 Site: position = -35 score = 5.06092 sequence = AACAGGTCAGACCTCTT Gene: Spro_0949: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -129 score = 5.06092 sequence = AACAGGTCAGACCTCTT Gene: ECA3474: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
|
*
Proteus mirabilis HI4320 Site: position = -44 score = 4.56427 sequence = AACAGGTCTGACCTCTG Gene: PMI0348: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -57 score = 4.57579 sequence = AACAGGTCCGACCTCTG Gene: plu1192: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) |
| CRON 2. | |||||||||||||
| fadH |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -46 score = 4.85244 sequence = AACTCATCCGACCACAT Gene: b3081: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
*
Salmonella typhimurium LT2 Site: position = -46 score = 4.85244 sequence = AACTCATCCGACCACAT Gene: STM3219: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -46 score = 4.85244 sequence = AACTCATCCGACCACAT Gene: CKO_04487: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -44 score = 4.85244 sequence = AACTCATCCGACCACAT Gene: KPN_03510: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
*
Enterobacter sp. 638 Site: position = -44 score = 4.85244 sequence = AACTCATCCGACCACAT Gene: Ent638_3539: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
*
Erwinia amylovora ATCC 49946 Site: position = -31 score = 4.96812 sequence = AACTCATCCGACCACTT Gene: EAM_0507: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
*
Yersinia pestis KIM Site: position = -57 score = 4.90675 sequence = ATCTCATCCGACCACTT Gene: y3589: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
*
Serratia proteamaculans 568 Site: position = -61 score = 4.90675 sequence = ATCTCATCCGACCACTT Gene: Spro_4309: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -36 score = 4.42055 sequence = GACTCATCAGACCAGTT Gene: ECA0655: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
|
*
Proteus mirabilis HI4320 Site: position = -32 score = 4.65353 sequence = ATCTCATCTGACCAGTA Gene: PMI3702: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -89 score = 4.6901 sequence = CACTCATCCGACCACTT Gene: plu3990: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) |
| CRON 3. | |||||||||||||
| fadI |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -43 score = 5.09295 sequence = ATCAGGTCAGACCACTT Gene: b2342: FadI component of anaerobic fatty acid oxidation complex |
*
Salmonella typhimurium LT2 Site: position = -42 score = 4.80324 sequence = ATCAGGTCAGACCACTA Gene: STM2389: FadI component of anaerobic fatty acid oxidation complex |
*
Citrobacter koseri ATCC BAA-895 Site: position = -43 score = 5.09295 sequence = ATCAGGTCAGACCACTT Gene: CKO_00448: FadI component of anaerobic fatty acid oxidation complex |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -44 score = 5.09295 sequence = ATCAGGTCAGACCACTT Gene: KPN_02724: FadI component of anaerobic fatty acid oxidation complex |
*
Enterobacter sp. 638 Site: position = -48 score = 5.09295 sequence = ATCAGGTCAGACCACTT Gene: Ent638_2882: FadI component of anaerobic fatty acid oxidation complex |
Gene: EAM_2347: FadI component of anaerobic fatty acid oxidation complex |
*
Yersinia pestis KIM Site: position = -66 score = 5.04757 sequence = ATCAGGTCAGACCTGTT Gene: y1579: FadI component of anaerobic fatty acid oxidation complex |
*
Serratia proteamaculans 568 Site: position = -56 score = 4.99956 sequence = ATCAGGTCAGACCTCTT Gene: Spro_3379: FadI component of anaerobic fatty acid oxidation complex |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -53 score = 5.02528 sequence = ATCAGGTCTGACCTGTT Gene: ECA3079: FadI component of anaerobic fatty acid oxidation complex |
|
*
Proteus mirabilis HI4320 Site: position = -50 score = 4.99956 sequence = ATCAGGTCAGACCTCTT Gene: PMI1808: FadI component of anaerobic fatty acid oxidation complex |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -81 score = 4.6899 sequence = ATCAGGTCAGACCTGTC Gene: plu3201: FadI component of anaerobic fatty acid oxidation complex |
FadI component of anaerobic fatty acid oxidation complex |
| fadJ |
Gene: b2341: FadJ component of anaerobic fatty acid oxidation complex |
Gene: STM2388: FadJ component of anaerobic fatty acid oxidation complex |
Gene: CKO_00449: FadJ component of anaerobic fatty acid oxidation complex |
Gene: KPN_02723: FadJ component of anaerobic fatty acid oxidation complex |
Gene: Ent638_2881: FadJ component of anaerobic fatty acid oxidation complex |
Gene: EAM_2346: FadJ component of anaerobic fatty acid oxidation complex |
Gene: y1580: FadJ component of anaerobic fatty acid oxidation complex |
Gene: Spro_3378: FadJ component of anaerobic fatty acid oxidation complex |
Gene: ECA3078: FadJ component of anaerobic fatty acid oxidation complex |
|
Gene: PMI1807: FadJ component of anaerobic fatty acid oxidation complex |
Gene: plu3200: FadJ component of anaerobic fatty acid oxidation complex |
FadJ component of anaerobic fatty acid oxidation complex |
| CRON 4. | |||||||||||||
| fadB |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -42 score = 5.12882 sequence = ATCTGGTACGACCAGAT Gene: b3846: fatty oxidation complex, alpha subunit FadB |
*
Salmonella typhimurium LT2 Site: position = -42 score = 5.12882 sequence = ATCTGGTACGACCAGAT Gene: STM3983: fatty oxidation complex, alpha subunit FadB |
*
Citrobacter koseri ATCC BAA-895 Site: position = -42 score = 5.1173 sequence = ATCTGGTATGACCAGAT Gene: CKO_00188: fatty oxidation complex, alpha subunit FadB |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -43 score = 5.1173 sequence = ATCTGGTATGACCAGAT Gene: KPN_04340: fatty oxidation complex, alpha subunit FadB |
*
Enterobacter sp. 638 Site: position = -43 score = 5.1173 sequence = ATCTGGTATGACCAGAT Gene: Ent638_3949: fatty oxidation complex, alpha subunit FadB |
*
Erwinia amylovora ATCC 49946 Site: position = -44 score = 5.1173 sequence = ATCTGGTATGACCAGAT Gene: EAM_0213: fatty oxidation complex, alpha subunit FadB |
*
Yersinia pestis KIM Site: position = -43 score = 4.99503 sequence = ATCTGGTCATACCAGAT Gene: y0464: fatty oxidation complex, alpha subunit FadB |
*
Serratia proteamaculans 568 Site: position = -41 score = 4.99503 sequence = ATCTGGTCATACCAGAT Gene: Spro_0261: fatty oxidation complex, alpha subunit FadB |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -43 score = 4.99503 sequence = ATCTGGTCATACCAGAT Gene: ECA0208: fatty oxidation complex, alpha subunit FadB |
|
*
Proteus mirabilis HI4320 Site: position = -38 score = 5.11071 sequence = ATCTGGTCATACCAGTT Gene: PMI3550: fatty oxidation complex, alpha subunit FadB |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -43 score = 4.99503 sequence = ATCTGGTCATACCAGAT Gene: plu4402: fatty oxidation complex, alpha subunit FadB |
fatty oxidation complex, alpha subunit FadB |
| fadA |
Gene: b3845: fatty oxidation complex, beta subunit FadA |
Gene: STM3982: fatty oxidation complex, beta subunit FadA |
Gene: CKO_00187: fatty oxidation complex, beta subunit FadA |
Gene: KPN_04339: fatty oxidation complex, beta subunit FadA |
Gene: Ent638_3950: fatty oxidation complex, beta subunit FadA |
Gene: EAM_0212: fatty oxidation complex, beta subunit FadA |
Gene: y0463: fatty oxidation complex, beta subunit FadA |
Gene: Spro_0260: fatty oxidation complex, beta subunit FadA |
Gene: ECA0207: fatty oxidation complex, beta subunit FadA |
|
Gene: PMI3549: fatty oxidation complex, beta subunit FadA |
Gene: plu4403: fatty oxidation complex, beta subunit FadA |
fatty oxidation complex, beta subunit FadA |
| CRON 5. | |||||||||||||
| fabA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -74 score = 4.47871 sequence = AACTGATCGGACTTGTT Gene: b0954: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Salmonella typhimurium LT2 Site: position = -74 score = 4.47871 sequence = AACTGATCGGACTTGTT Gene: STM1067: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -74 score = 4.47871 sequence = AACTGATCGGACTTGTT Gene: CKO_02114: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -75 score = 4.47871 sequence = AACTGATCGGACTTGTT Gene: KPN_00983: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Enterobacter sp. 638 Site: position = -74 score = 4.47871 sequence = AACTGATCGGACTTGTT Gene: Ent638_1466: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Erwinia amylovora ATCC 49946 Site: position = -75 score = 3.30774 sequence = AGTTGATCGGACTTGTT Gene: EAM_1374: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
Gene: y2740: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
Gene: Spro_1751: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -88 score = 3.80327 sequence = AACTGGTTCAACCAGAC Gene: ECA1748: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Edwardsiella tarda EIB202 Site: position = -74 score = 3.32486 sequence = GGCTGATCGGACTTGTT Gene: ETAE_1264: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Proteus mirabilis HI4320 Site: position = -74 score = 3.47576 sequence = AAGTGATCGGAGTTGTT Gene: PMI0782: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -75 score = 3.24528 sequence = GTCTGATCGGAGTTGTT Gene: plu1772: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
| CRON 6. | |||||||||||||
| fadD |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -89 score = 4.42178 sequence = AGCTGGTATGATGAGTT Gene: b1805: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
*
Salmonella typhimurium LT2 Site: position = -89 score = 4.72969 sequence = AACTGGTACGCTGAGTT Gene: STM1818: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
|
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -55 score = 4.72969 sequence = AACTGGTACGCTGAGTT Gene: KPN_02322: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
*
Enterobacter sp. 638 Site: position = -55 score = 4.72969 sequence = AACTGGTACGCTGAGTT Gene: Ent638_2375: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
*
Erwinia amylovora ATCC 49946 Site: position = -88 score = 3.40851 sequence = AGCGGGTGCGATGAGTT Gene: EAM_1956: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
*
Yersinia pestis KIM Site: position = -39 score = 4.74047 sequence = AACTGGTAAGCTGAGTT Gene: y2236: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
*
Serratia proteamaculans 568 Site: position = -57 score = 4.88187 sequence = AACTGGTCTGCTGAGTT Gene: Spro_2760: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -91 score = 4.74047 sequence = AACTGGTAAGCTGAGTT Gene: ECA2372: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
Gene: ETAE_1459: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
*
Proteus mirabilis HI4320 Site: position = -79 score = 3.37125 sequence = TGCTGGTAGGATGAGTT Gene: PMI1166: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -95 score = 4.72969 sequence = AACTGGTACGCTGAGTT Gene: plu2134: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
| CRON 7. | |||||||||||||
| fadL |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -102 score = 4.42386 sequence = CACTGGTCTGATTTCTA Site: position = -126 score = 4.19106 sequence = AGCTGGTCCGACCTATA Gene: b2344: Long-chain fatty acid transport protein |
*
Salmonella typhimurium LT2 Site: position = -119 score = 4.20183 sequence = AGCTGGTCAGACCTATA Site: position = -95 score = 4.42386 sequence = CACTGGTCTGATTTCTA Gene: STM2391: Long-chain fatty acid transport protein |
*
Citrobacter koseri ATCC BAA-895 Site: position = -120 score = 4.20183 sequence = AGCTGGTCAGACCTATA Site: position = -96 score = 4.3559 sequence = CACTGGTCTGATTTCTC Gene: CKO_00446: Long-chain fatty acid transport protein |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -121 score = 4.68797 sequence = ATCTGGTCAGACCTATA Site: position = -97 score = 4.71357 sequence = CACTGGTCTGATTTCTT Gene: KPN_02726: Long-chain fatty acid transport protein |
*
Enterobacter sp. 638 Site: position = -126 score = 4.68797 sequence = ATCTGGTCAGACCTATA Site: position = -102 score = 4.42386 sequence = CACTGGTCTGATTTCTA Gene: Ent638_2884: Long-chain fatty acid transport protein |
*
Erwinia amylovora ATCC 49946 Site: position = -126 score = 3.23764 sequence = TACTGCTCATACCTATA Site: position = -102 score = 4.76158 sequence = CACTGGTCTGATTTGTT Gene: EAM_2348: Long-chain fatty acid transport protein |
*
Yersinia pestis KIM Site: position = -117 score = 3.72682 sequence = CACAGGTCGGACCTATA Site: position = -93 score = 4.1528 sequence = CACTGGTCTGCTTTGTC Gene: y1577: Long-chain fatty acid transport protein |
*
Serratia proteamaculans 568 Site: position = -128 score = 3.72682 sequence = CACAGGTCGGACCTATA Site: position = -104 score = 4.40391 sequence = CACTGGTCTGATTTGTC Gene: Spro_3381: Long-chain fatty acid transport protein |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -96 score = 4.68192 sequence = AACTGGTCTGATTTGTC Gene: ECA3081: Long-chain fatty acid transport protein |
*
Edwardsiella tarda EIB202 Site: position = -99 score = 4.76158 sequence = CACTGGTCTGATTTGTT Gene: ETAE_2451: Long-chain fatty acid transport protein |
*
Proteus mirabilis HI4320 Site: position = -94 score = 4.68192 sequence = AACTGGTCTGATTTGTC Gene: PMI1810: Long-chain fatty acid transport protein |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -277 score = 3.77136 sequence = AACTCACACTACCTCTT Site: position = -94 score = 4.68192 sequence = AACTGGTCTGATTTGTC Gene: plu3202: Long-chain fatty acid transport protein |
Long-chain fatty acid transport protein |
| CRON 8. | |||||||||||||
| fadM |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -59 score = 4.45683 sequence = AAGAGGTCATACCAGTT Gene: b0443: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
*
Salmonella typhimurium LT2 Site: position = -70 score = 3.85048 sequence = TAGAGGTCATACCAGTT Gene: STM0454: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
*
Citrobacter koseri ATCC BAA-895 Site: position = -59 score = 4.39546 sequence = ATGAGGTCATACCAGTT Gene: CKO_02717: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -54 score = 4.29728 sequence = AAGTGGTGTGACCTCTT Gene: KPN_00405: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
*
Enterobacter sp. 638 Site: position = -58 score = 4.09915 sequence = AAGAGGTCATACCAGTC Gene: Ent638_0910: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
|
*
Yersinia pestis KIM Site: position = -49 score = 3.77834 sequence = TTGAGGTCCTACCAGTT Gene: y1033: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
*
Serratia proteamaculans 568 Site: position = -97 score = 4.26541 sequence = TACAGGTCTTACCAGTT Gene: Spro_1101: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -44 score = 4.36622 sequence = ATCAGGTCGTACCAGTT Gene: ECA1154: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
|
Gene: PMI0121: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
Gene: plu3863: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) |
| CRON 9. | |||||||||||||
| fadR |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -51 score = 4.27223 sequence = CTCTGGTATGATGAGTC Gene: b1187: Transcriptional regulator for fatty acid degradation FadR, GntR family |
*
Salmonella typhimurium LT2 Site: position = -51 score = 3.82721 sequence = GTCTGGTATGATGAGTG Gene: STM1805: Transcriptional regulator for fatty acid degradation FadR, GntR family |
*
Citrobacter koseri ATCC BAA-895 Site: position = 9 score = 3.82721 sequence = GTCTGGTATGATGAGTG Gene: CKO_01189: Transcriptional regulator for fatty acid degradation FadR, GntR family |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -49 score = 4.15554 sequence = CTCTGGTATGATGAGTG Gene: KPN_02311: Transcriptional regulator for fatty acid degradation FadR, GntR family |
*
Enterobacter sp. 638 Site: position = -50 score = 4.27223 sequence = CTCTGGTATGATGAGTC Gene: Ent638_2365: Transcriptional regulator for fatty acid degradation FadR, GntR family |
Gene: EAM_1946: Transcriptional regulator for fatty acid degradation FadR, GntR family |
*
Yersinia pestis KIM Site: position = -58 score = 3.45359 sequence = GTCTGGTATGATGAGCG Gene: y2177: Transcriptional regulator for fatty acid degradation FadR, GntR family |
*
Serratia proteamaculans 568 Site: position = -59 score = 4.39167 sequence = ATCTGGTATGATCAGCC Gene: Spro_2748: Transcriptional regulator for fatty acid degradation FadR, GntR family |
Gene: ECA2360: Transcriptional regulator for fatty acid degradation FadR, GntR family |
*
Edwardsiella tarda EIB202 Site: position = -62 score = 4.24459 sequence = ATCTGGTATGATGAGCA Gene: ETAE_1472: Transcriptional regulator for fatty acid degradation FadR, GntR family |
*
Proteus mirabilis HI4320 Site: position = -57 score = 3.3541 sequence = TTCTGATATTATCTTTT Gene: PMI1510: Transcriptional regulator for fatty acid degradation FadR, GntR family |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -57 score = 3.20698 sequence = TTCTGATATAATTTCAT Gene: plu2562: Transcriptional regulator for fatty acid degradation FadR, GntR family |
Transcriptional regulator for fatty acid degradation FadR, GntR family |
| CRON 10. | |||||||||||||
| fabB |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -83 score = 3.32486 sequence = GGCTGATCGGACTTGTT Gene: b2323: 3-oxoacyl-(acyl carrier protein) synthase |
*
Salmonella typhimurium LT2 Site: position = -84 score = 3.32486 sequence = GGCTGATCGGACTTGTT Gene: STM2378: 3-oxoacyl-(acyl carrier protein) synthase |
*
Citrobacter koseri ATCC BAA-895 Site: position = -83 score = 3.32486 sequence = GGCTGATCGGACTTGTT Gene: CKO_00462: 3-oxoacyl-(acyl carrier protein) synthase |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -83 score = 3.811 sequence = GTCTGATCGGACTTGTT Gene: KPN_02713: 3-oxoacyl-(acyl carrier protein) synthase |
*
Enterobacter sp. 638 Site: position = -82 score = 3.32486 sequence = GGCTGATCGGACTTGTT Gene: Ent638_2871: 3-oxoacyl-(acyl carrier protein) synthase |
*
Erwinia amylovora ATCC 49946 Site: position = -82 score = 3.93121 sequence = AGCTGATCGGACTTGTT Gene: EAM_2336: 3-oxoacyl-(acyl carrier protein) synthase |
*
Yersinia pestis KIM Site: position = -85 score = 3.6532 sequence = CGCTGATCGGACTTGTT Gene: y1591: 3-oxoacyl-(acyl carrier protein) synthase |
*
Serratia proteamaculans 568 Site: position = -84 score = 3.6532 sequence = CGCTGATCGGACTTGTT Gene: Spro_3368: 3-oxoacyl-(acyl carrier protein) synthase |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -86 score = 3.32486 sequence = GGCTGATCGGACTTGTT Gene: ECA3063: 3-oxoacyl-(acyl carrier protein) synthase |
*
Edwardsiella tarda EIB202 Site: position = -126 score = 3.6583 sequence = ATCTGGTTTTACCAGCG Gene: ETAE_2421: 3-oxoacyl-(acyl carrier protein) synthase |
*
Proteus mirabilis HI4320 Site: position = -89 score = 3.32486 sequence = TCCTGATCGGACTTGTT Gene: PMI1795: 3-oxoacyl-(acyl carrier protein) synthase |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -96 score = 3.32486 sequence = TCCTGATCGGACTTGTT Gene: plu3184: 3-oxoacyl-(acyl carrier protein) synthase |
3-oxoacyl-(acyl carrier protein) synthase |
| CRON 11. | |||||||||||||
| iclR |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -86 score = 4.45041 sequence = AACTCATCGGATCAGTT Gene: b4018: Acetate operon transcriptional repressor, IclR family |
*
Salmonella typhimurium LT2 Site: position = -85 score = 4.62809 sequence = CACTCATCCGATCAGTT Gene: STM4187: Acetate operon transcriptional repressor, IclR family |
*
Citrobacter koseri ATCC BAA-895 Site: position = -84 score = 3.78337 sequence = CACTCCTCCGATCAGTG Gene: CKO_03903: Acetate operon transcriptional repressor, IclR family |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -10 score = 3.68501 sequence = CACTCCTCCGATGAGTC Gene: KPN_04398: Acetate operon transcriptional repressor, IclR family |
*
Enterobacter sp. 638 Site: position = -86 score = 3.57172 sequence = TACTCCTCCGATCAGTC Gene: Ent638_0221: Acetate operon transcriptional repressor, IclR family |
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*
Yersinia pestis KIM Site: position = -338 score = 3.3393 sequence = GACTCATCGGATGAGTA Gene: y0019: Acetate operon transcriptional repressor, IclR family |
*
Serratia proteamaculans 568 Site: position = -88 score = 4.26615 sequence = AACAGATCCGATGAGCT Gene: Spro_4491: Acetate operon transcriptional repressor, IclR family |
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Gene: PMI2759: Acetate operon transcriptional repressor, IclR family |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -86 score = 3.20497 sequence = CACACATCGGATGAGTG Gene: plu4392: Acetate operon transcriptional repressor, IclR family |
Acetate operon transcriptional repressor, IclR family |
| CRON 12. | |||||||||||||
| yebV |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -43 score = 3.64584 sequence = GACTGGTCGTACCACAA Gene: b1836: hypothetical protein |
*
Salmonella typhimurium LT2 Site: position = -40 score = 4.25219 sequence = AACTGGTCGTACCACAA Gene: STM1851: hypothetical protein |
*
Citrobacter koseri ATCC BAA-895 Site: position = -40 score = 4.25219 sequence = AACTGGTCGTACCACAA Gene: CKO_01137: hypothetical protein |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -42 score = 4.25219 sequence = AACTGGTCGTACCACAA Gene: KPN_02352: hypothetical protein |
*
Enterobacter sp. 638 Site: position = -42 score = 4.00936 sequence = CACTGGTCGAACCAGAT Gene: Ent638_2406: hypothetical protein |
|
*
Yersinia pestis KIM Site: position = -42 score = 4.5957 sequence = ATCTGGTCATACCTCCT Gene: y1856: hypothetical protein |
*
Serratia proteamaculans 568 Site: position = -43 score = 4.61246 sequence = AACTGGTCACACCTCAT Gene: Spro_2106: hypothetical protein |
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Gene: PMI1011: hypothetical protein |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -39 score = 4.77837 sequence = CACTGGTCTTACCTGTT Gene: plu2685: hypothetical protein |
hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |