Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FadR in Escherichia coli str. K-12 substr. MG1655

Properties
Regulator type: Transcription factor
TF locus tag: b1187
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Regulog: FadR - Enterobacteriales
Statistics of regulated genes:
- Genes 14
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 130 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -43
Score: 3.6
Sequence: GACTGGTCGTACCACAA
Locus tag: b1836
Name: yebV
Funciton: hypothetical protein
b1836
yebV
hypothetical protein
Position: -46
Score: 4.9
Sequence: AACTCATCCGACCACAT
Locus tag: b3081
Name: fadH
Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
b3081
fadH
2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -38
Score: 4.5
Sequence: AAGTGGTCAGACCTCCT
Locus tag: b0221
Name: fadE
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
b0221
fadE
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -43
Score: 5.1
Sequence: ATCAGGTCAGACCACTT
Locus tag: b2342
Name: fadI
Funciton: FadI component of anaerobic fatty acid oxidation complex
Locus tag: b2341
Name: fadJ
Funciton: FadJ component of anaerobic fatty acid oxidation complex
b2342
fadI
FadI component of anaerobic fatty acid oxidation complex
b2341
fadJ
FadJ component of anaerobic fatty acid oxidation complex
Position: -42
Score: 5.1
Sequence: ATCTGGTACGACCAGAT
Locus tag: b3846
Name: fadB
Funciton: fatty oxidation complex, alpha subunit FadB
Locus tag: b3845
Name: fadA
Funciton: fatty oxidation complex, beta subunit FadA
b3846
fadB
fatty oxidation complex, alpha subunit FadB
b3845
fadA
fatty oxidation complex, beta subunit FadA
Position: -86
Score: 4.5
Sequence: AACTCATCGGATCAGTT
Locus tag: b4018
Name: iclR
Funciton: Acetate operon transcriptional repressor, IclR family
b4018
iclR
Acetate operon transcriptional repressor, IclR family
Position: -74
Score: 4.5
Sequence: AACTGATCGGACTTGTT
Locus tag: b0954
Name: fabA
Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
b0954
fabA
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -126
Score: 4.2
Sequence: AGCTGGTCCGACCTATA
Position: -102
Score: 4.4
Sequence: CACTGGTCTGATTTCTA
Locus tag: b2344
Name: fadL
Funciton: Long-chain fatty acid transport protein
b2344
fadL
Long-chain fatty acid transport protein
Position: -89
Score: 4.4
Sequence: AGCTGGTATGATGAGTT
Locus tag: b1805
Name: fadD
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
b1805
fadD
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -59
Score: 4.5
Sequence: AAGAGGTCATACCAGTT
Locus tag: b0443
Name: fadM
Funciton: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
b0443
fadM
Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
Position: -51
Score: 4.3
Sequence: CTCTGGTATGATGAGTC
Locus tag: b1187
Name: fadR
Funciton: Transcriptional regulator for fatty acid degradation FadR, GntR family
b1187
fadR
Transcriptional regulator for fatty acid degradation FadR, GntR family
Position: -83
Score: 3.3
Sequence: GGCTGATCGGACTTGTT
Locus tag: b2323
Name: fabB
Funciton: 3-oxoacyl-(acyl carrier protein) synthase
b2323
fabB
3-oxoacyl-(acyl carrier protein) synthase
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