Regulon of FadR in Serratia proteamaculans 568

Properties
Regulator type:	Transcription factor
TF locus tag:	Spro_2748
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Enterobacteriales
Statistics of regulated genes:
- Genes	13
- Operons	11
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 130 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - FadR
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -43 Score: 4.6 Sequence: AACTGGTCACACCTCAT Locus tag: Spro_2106 Name: yebV Funciton: hypothetical protein
	Spro_2106	yebV	hypothetical protein
Position: -59 Score: 4.4 Sequence: ATCTGGTATGATCAGCC Locus tag: Spro_2748 Name: fadR Funciton: Transcriptional regulator for fatty acid degradation FadR, GntR family
	Spro_2748	fadR	Transcriptional regulator for fatty acid degradation FadR, GntR family
Position: -128 Score: 3.7 Sequence: CACAGGTCGGACCTATA Position: -104 Score: 4.4 Sequence: CACTGGTCTGATTTGTC Locus tag: Spro_3381 Name: fadL Funciton: Long-chain fatty acid transport protein
	Spro_3381	fadL	Long-chain fatty acid transport protein
Position: -35 Score: 5.1 Sequence: AACAGGTCAGACCTCTT Locus tag: Spro_0949 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Spro_0949	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -61 Score: 4.9 Sequence: ATCTCATCCGACCACTT Locus tag: Spro_4309 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	Spro_4309	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -56 Score: 5 Sequence: ATCAGGTCAGACCTCTT Locus tag: Spro_3379 Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex Locus tag: Spro_3378 Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex
	Spro_3379	fadI	FadI component of anaerobic fatty acid oxidation complex
	Spro_3378	fadJ	FadJ component of anaerobic fatty acid oxidation complex
Position: -57 Score: 4.9 Sequence: AACTGGTCTGCTGAGTT Locus tag: Spro_2760 Name: fadD Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Spro_2760	fadD	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -41 Score: 5 Sequence: ATCTGGTCATACCAGAT Locus tag: Spro_0261 Name: fadB Funciton: fatty oxidation complex, alpha subunit FadB Locus tag: Spro_0260 Name: fadA Funciton: fatty oxidation complex, beta subunit FadA
	Spro_0261	fadB	fatty oxidation complex, alpha subunit FadB
	Spro_0260	fadA	fatty oxidation complex, beta subunit FadA
Position: -88 Score: 4.3 Sequence: AACAGATCCGATGAGCT Locus tag: Spro_4491 Name: iclR Funciton: Acetate operon transcriptional repressor, IclR family
	Spro_4491	iclR	Acetate operon transcriptional repressor, IclR family
Position: -97 Score: 4.3 Sequence: TACAGGTCTTACCAGTT Locus tag: Spro_1101 Name: fadM Funciton: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
	Spro_1101	fadM	Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
Position: -84 Score: 3.7 Sequence: CGCTGATCGGACTTGTT Locus tag: Spro_3368 Name: fabB Funciton: 3-oxoacyl-(acyl carrier protein) synthase
	Spro_3368	fabB	3-oxoacyl-(acyl carrier protein) synthase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of FadR in Serratia proteamaculans 568

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --