Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FadR in Salmonella typhimurium LT2

Properties
Regulator type: Transcription factor
TF locus tag: STM1805
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Regulog: FadR - Enterobacteriales
Statistics of regulated genes:
- Genes 14
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 130 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -40
Score: 4.3
Sequence: AACTGGTCGTACCACAA
Locus tag: STM1851
Name: yebV
Funciton: hypothetical protein
STM1851
yebV
hypothetical protein
Position: -119
Score: 4.2
Sequence: AGCTGGTCAGACCTATA
Position: -95
Score: 4.4
Sequence: CACTGGTCTGATTTCTA
Locus tag: STM2391
Name: fadL
Funciton: Long-chain fatty acid transport protein
STM2391
fadL
Long-chain fatty acid transport protein
Position: -39
Score: 4.5
Sequence: AAGTGGTCAGACCTCCT
Locus tag: STM0309
Name: fadE
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
STM0309
fadE
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -46
Score: 4.9
Sequence: AACTCATCCGACCACAT
Locus tag: STM3219
Name: fadH
Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
STM3219
fadH
2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -42
Score: 4.8
Sequence: ATCAGGTCAGACCACTA
Locus tag: STM2389
Name: fadI
Funciton: FadI component of anaerobic fatty acid oxidation complex
Locus tag: STM2388
Name: fadJ
Funciton: FadJ component of anaerobic fatty acid oxidation complex
STM2389
fadI
FadI component of anaerobic fatty acid oxidation complex
STM2388
fadJ
FadJ component of anaerobic fatty acid oxidation complex
Position: -42
Score: 5.1
Sequence: ATCTGGTACGACCAGAT
Locus tag: STM3983
Name: fadB
Funciton: fatty oxidation complex, alpha subunit FadB
Locus tag: STM3982
Name: fadA
Funciton: fatty oxidation complex, beta subunit FadA
STM3983
fadB
fatty oxidation complex, alpha subunit FadB
STM3982
fadA
fatty oxidation complex, beta subunit FadA
Position: -85
Score: 4.6
Sequence: CACTCATCCGATCAGTT
Locus tag: STM4187
Name: iclR
Funciton: Acetate operon transcriptional repressor, IclR family
STM4187
iclR
Acetate operon transcriptional repressor, IclR family
Position: -74
Score: 4.5
Sequence: AACTGATCGGACTTGTT
Locus tag: STM1067
Name: fabA
Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
STM1067
fabA
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -89
Score: 4.7
Sequence: AACTGGTACGCTGAGTT
Locus tag: STM1818
Name: fadD
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
STM1818
fadD
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -70
Score: 3.9
Sequence: TAGAGGTCATACCAGTT
Locus tag: STM0454
Name: fadM
Funciton: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
STM0454
fadM
Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
Position: -51
Score: 3.8
Sequence: GTCTGGTATGATGAGTG
Locus tag: STM1805
Name: fadR
Funciton: Transcriptional regulator for fatty acid degradation FadR, GntR family
STM1805
fadR
Transcriptional regulator for fatty acid degradation FadR, GntR family
Position: -84
Score: 3.3
Sequence: GGCTGATCGGACTTGTT
Locus tag: STM2378
Name: fabB
Funciton: 3-oxoacyl-(acyl carrier protein) synthase
STM2378
fabB
3-oxoacyl-(acyl carrier protein) synthase
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