Regulon of FadR in Erwinia carotovora subsp. atroseptica SCRI1043

Properties
Regulator type:	Transcription factor
TF locus tag:	ECA2360
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Enterobacteriales
Statistics of regulated genes:
- Genes	11
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 130 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - FadR
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -96 Score: 4.7 Sequence: AACTGGTCTGATTTGTC Locus tag: ECA3081 Name: fadL Funciton: Long-chain fatty acid transport protein
	ECA3081	fadL	Long-chain fatty acid transport protein
Position: -36 Score: 4.4 Sequence: GACTCATCAGACCAGTT Locus tag: ECA0655 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	ECA0655	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -129 Score: 5.1 Sequence: AACAGGTCAGACCTCTT Locus tag: ECA3474 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	ECA3474	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -53 Score: 5 Sequence: ATCAGGTCTGACCTGTT Locus tag: ECA3079 Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex Locus tag: ECA3078 Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex
	ECA3079	fadI	FadI component of anaerobic fatty acid oxidation complex
	ECA3078	fadJ	FadJ component of anaerobic fatty acid oxidation complex
Position: -91 Score: 4.7 Sequence: AACTGGTAAGCTGAGTT Locus tag: ECA2372 Name: fadD Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	ECA2372	fadD	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -43 Score: 5 Sequence: ATCTGGTCATACCAGAT Locus tag: ECA0208 Name: fadB Funciton: fatty oxidation complex, alpha subunit FadB Locus tag: ECA0207 Name: fadA Funciton: fatty oxidation complex, beta subunit FadA
	ECA0208	fadB	fatty oxidation complex, alpha subunit FadB
	ECA0207	fadA	fatty oxidation complex, beta subunit FadA
Position: -88 Score: 3.8 Sequence: AACTGGTTCAACCAGAC Locus tag: ECA1748 Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
	ECA1748	fabA	3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
Position: -44 Score: 4.4 Sequence: ATCAGGTCGTACCAGTT Locus tag: ECA1154 Name: fadM Funciton: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
	ECA1154	fadM	Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
Position: -86 Score: 3.3 Sequence: GGCTGATCGGACTTGTT Locus tag: ECA3063 Name: fabB Funciton: 3-oxoacyl-(acyl carrier protein) synthase
	ECA3063	fabB	3-oxoacyl-(acyl carrier protein) synthase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of FadR in Erwinia carotovora subsp. atroseptica SCRI1043

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --