Regulon of FadR in Yersinia pestis KIM

Properties
Regulator type:	Transcription factor
TF locus tag:	y2177
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Enterobacteriales
Statistics of regulated genes:
- Genes	13
- Operons	11
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 130 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - FadR
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -42 Score: 4.6 Sequence: ATCTGGTCATACCTCCT Locus tag: y1856 Name: yebV Funciton: hypothetical protein
	y1856	yebV	hypothetical protein
Position: -58 Score: 3.5 Sequence: GTCTGGTATGATGAGCG Locus tag: y2177 Name: fadR Funciton: Transcriptional regulator for fatty acid degradation FadR, GntR family
	y2177	fadR	Transcriptional regulator for fatty acid degradation FadR, GntR family
Position: -117 Score: 3.7 Sequence: CACAGGTCGGACCTATA Position: -93 Score: 4.2 Sequence: CACTGGTCTGCTTTGTC Locus tag: y1577 Name: fadL Funciton: Long-chain fatty acid transport protein
	y1577	fadL	Long-chain fatty acid transport protein
Position: -36 Score: 4.7 Sequence: AACAGGTCAGACCTCCT Locus tag: y0946 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	y0946	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -57 Score: 4.9 Sequence: ATCTCATCCGACCACTT Locus tag: y3589 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	y3589	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -66 Score: 5 Sequence: ATCAGGTCAGACCTGTT Locus tag: y1579 Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex Locus tag: y1580 Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex
	y1579	fadI	FadI component of anaerobic fatty acid oxidation complex
	y1580	fadJ	FadJ component of anaerobic fatty acid oxidation complex
Position: -39 Score: 4.7 Sequence: AACTGGTAAGCTGAGTT Locus tag: y2236 Name: fadD Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	y2236	fadD	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -43 Score: 5 Sequence: ATCTGGTCATACCAGAT Locus tag: y0464 Name: fadB Funciton: fatty oxidation complex, alpha subunit FadB Locus tag: y0463 Name: fadA Funciton: fatty oxidation complex, beta subunit FadA
	y0464	fadB	fatty oxidation complex, alpha subunit FadB
	y0463	fadA	fatty oxidation complex, beta subunit FadA
Position: -338 Score: 3.3 Sequence: GACTCATCGGATGAGTA Locus tag: y0019 Name: iclR Funciton: Acetate operon transcriptional repressor, IclR family
	y0019	iclR	Acetate operon transcriptional repressor, IclR family
Position: -49 Score: 3.8 Sequence: TTGAGGTCCTACCAGTT Locus tag: y1033 Name: fadM Funciton: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
	y1033	fadM	Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-)
Position: -85 Score: 3.7 Sequence: CGCTGATCGGACTTGTT Locus tag: y1591 Name: fabB Funciton: 3-oxoacyl-(acyl carrier protein) synthase
	y1591	fabB	3-oxoacyl-(acyl carrier protein) synthase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of FadR in Yersinia pestis KIM

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --