Regulons of Mycobacterium smegmatis str. MC2 155
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
AcnR |
Citrate |
Tricarboxylic acid cycle |
2 |
2 |
| TF |
AmtR |
GlnK-AMP, signal transduction protein |
Nitrogen metabolism |
2 |
1 |
| TF |
ArgR |
Arginine |
Arginine biosynthesis |
1 |
1 |
| TF |
ArsR |
Arsenite; Arsenate |
Arsenic resistance |
2 |
3 |
| TF |
BioQ |
Biotin |
Biotin biosynthesis |
4 |
5 |
| TF |
BioQ |
Biotin |
Biotin biosynthesis |
3 |
4 |
| TF |
DosR |
Oxygen; Carbon monoxide; Nitric oxide |
Dormancy |
25 |
22 |
| TF |
HrcA |
Heat shock |
Heat shock response |
4 |
5 |
| TF |
HspR |
Heat shock |
Heat shock response |
4 |
5 |
| TF |
IolR |
|
Inositol utilization |
4 |
5 |
| TF |
LexA |
DNA damage |
SOS response |
9 |
9 |
| TF |
LldR |
L-lactate |
Lactate utilization |
2 |
4 |
| TF |
LtbR |
|
Leucine biosynthesis |
2 |
4 |
| TF |
MSMEG_3264 |
|
Erythritol utilization; D-threitol utilization |
2 |
2 |
| TF |
MSMEG_3606 |
|
D-threitol utilization |
2 |
4 |
| TF |
MSMEG_4140 |
|
Metabolite transport |
4 |
4 |
| TF |
Mce2R |
|
Fatty acid metabolism |
1 |
1 |
| TF |
MntR |
Manganese ion, (Mn2+) |
Manganese homeostasis |
2 |
2 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
6 |
8 |
| TF |
NrtR |
Adenosine diphosphate ribose |
NAD biosynthesis |
2 |
2 |
| TF |
PdxQ |
Pyridoxal-5-phosphate |
Pyridoxine/pyridoxal homeostasis; Metabolite transport |
2 |
2 |
| TF |
PdxR3 |
|
Pyridoxine/pyridoxal homeostasis |
2 |
2 |
| TF |
PhnF |
|
Phosphonate utilization; 2-aminoethylphosphonate utilization |
6 |
7 |
| TF |
RhaR |
Rhamnose |
Rhamnose utilization |
1 |
1 |
| TF |
SutR |
Sulfate |
Sulfur metabolism |
1 |
1 |
| TF |
Znr |
Zinc ion, (Zn2+) |
Zinc homeostasis |
1 |
1 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
8 |
8 |
| RNA |
Cobalamin |
Adenosylcobalamin |
Cobalamin biosynthesis |
7 |
5 |
| RNA |
Glycine |
Glycine |
Glycine metabolism |
3 |
2 |
| RNA |
PyrR |
PyrR |
Pyrimidine metabolism |
1 |
1 |
| RNA |
SAH_riboswitch |
S-adenosylhomocysteine |
Methionine metabolism |
1 |
1 |
| RNA |
SAM-IV |
S-adenosylmethionine |
Sulfur metabolism |
2 |
2 |
| RNA |
T-box(Ile) |
Ile-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
3 |
3 |
| RNA |
ydaO-yuaA |
|
Osmotic stress response; Cell wall metabolism |
1 |
1 |
| RNA |
ykoK |
Magnesium ion, (Mg2+) |
Magnesium homeostasis |
1 |
1 |
| RNA |
yybP-ykoY |
|
|
2 |
2 |
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