Regulon of PhnF in Mycobacterium smegmatis str. MC2 155

Properties
Regulator type:	Transcription factor
TF locus tag:	MSMEG_0286, MSMEG_0650
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Phosphonate utilization; 2-aminoethylphosphonate utilization
Effector:
Regulog:	PhnF - Mycobacteriaceae
Statistics of regulated genes:
- Genes	12
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 20 sites [see more]

Member of regulog collections

By taxonomy - Mycobacteriaceae
By TF family - GntR/Others
By pathway - Phosphonate utilization
By pathway - 2-aminoethylphosphonate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -34 Score: 6.4 Sequence: ATTGGTATAGACCAAT Locus tag: MSMEG_0287 Name: COG4341 Funciton: HD phosphohydrolase-like protein Locus tag: MSMEG_0286 Name: phnF Funciton: Transcriptional regulator for phosphonate utilization, GntR family
	MSMEG_0287	COG4341	HD phosphohydrolase-like protein
	MSMEG_0286	phnF	Transcriptional regulator for phosphonate utilization, GntR family
Position: -100 Score: 5.4 Sequence: GGTGGTCTATACCAAC Position: -42 Score: 5.4 Sequence: CTTGGTCTATACCAGC Locus tag: MSMEG_0650 Name: phnF2 Funciton: Transcriptional regulator for phosphonate utilization, GntR family
	MSMEG_0650	phnF2	Transcriptional regulator for phosphonate utilization, GntR family
Position: -156 Score: 5.4 Sequence: GCTGGTATAGACCAAG Position: -98 Score: 5.4 Sequence: GTTGGTATAGACCACC Locus tag: MSMEG_0649 Name: phnD Funciton: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) Locus tag: MSMEG_0647 Name: phnC Funciton: Phosphonate ABC transporter ATP-binding protein Locus tag: MSMEG_0646 Name: phnE Funciton: Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)
	MSMEG_0649	phnD	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
	MSMEG_0647	phnC	Phosphonate ABC transporter ATP-binding protein
	MSMEG_0646	phnE	Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)
Position: -97 Score: 6.4 Sequence: ATTGGTCTATACCAAT Locus tag: MSMEG_0288 Name: COG0665 Funciton: Putative FAD dependent oxidoreductase
	MSMEG_0288	COG0665	Putative FAD dependent oxidoreductase
Position: -135 Score: 6 Sequence: ATTGGTCTATACCAAA Locus tag: MSMEG_6668 Name: phnS Funciton: Probable 2-aminoethylphosphonate ABC transporter, periplasmic protein Locus tag: MSMEG_6669 Name: phnU Funciton: Probable 2-aminoethylphosphonate ABC transporter, permease protein 1 Locus tag: MSMEG_6670 Name: phnV Funciton: Probable 2-aminoethylphosphonate ABC transporter, permease protein 2 Locus tag: MSMEG_6671 Name: phnT Funciton: Probable 2-aminoethylphosphonate ABC transporter, ATP-binding protein Locus tag: MSMEG_6672 Name: COG1524 Funciton: Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9)
	MSMEG_6668	phnS	Probable 2-aminoethylphosphonate ABC transporter, periplasmic protein
	MSMEG_6669	phnU	Probable 2-aminoethylphosphonate ABC transporter, permease protein 1
	MSMEG_6670	phnV	Probable 2-aminoethylphosphonate ABC transporter, permease protein 2
	MSMEG_6671	phnT	Probable 2-aminoethylphosphonate ABC transporter, ATP-binding protein
	MSMEG_6672	COG1524	Alkaline phosphodiesterase I (EC 3.1.4.1) / Nucleotide pyrophosphatase (EC 3.6.1.9)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD