Regulon of Zur in Mycobacterium smegmatis str. MC2 155
| Regulator type: | Transcription factor |
| TF locus tag: | MSMEG_4487 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Regulog: | Zur - Mycobacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Mycobacteriaceae
- By trascription factor - Zur
- By TF family - FUR
- By effector - Zinc ion, (Zn2+)
- By pathway - Zinc homeostasis
| Locus Tag | Name | Function | |
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Position: -76
Score: 5.3 Sequence: TAACGATAACCGTTTGCATTA
Position: -30
Score: 6.1 Sequence: TATTGAAAATCATTTTCGATA
Locus tag: MSMEG_6048
Name: yciC2 Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family |
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yciC2
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Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
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Position: -20
Score: 6 Sequence: TAATGAAAACGATTTCCAATT
Locus tag: MSMEG_4486
Name: znr Funciton: Zinc homeostasis transcriptional regulator Znr, ArsR family
Locus tag: MSMEG_4487
Name: zur Funciton: Zinc homeostasis transcriptional regulator Zur, Fur family |
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znr
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Zinc homeostasis transcriptional regulator Znr, ArsR family
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zur
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Zinc homeostasis transcriptional regulator Zur, Fur family
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Position: -55
Score: 6.3 Sequence: TATTGAAAACGATTGTCATTA
Locus tag: MSMEG_6068
Name: rpmB1 Funciton: 50S ribosomal protein L28
Locus tag: MSMEG_6067
Name: rpmG1 Funciton: 50S ribosomal protein L33
Locus tag: MSMEG_6066
Name: rpsN2 Funciton: SSU ribosomal protein S14p
Locus tag: MSMEG_6065
Name: rpsR1 Funciton: 30S ribosomal protein S18 |
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rpmB1
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50S ribosomal protein L28
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rpmG1
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50S ribosomal protein L33
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rpsN2
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SSU ribosomal protein S14p
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rpsR1
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30S ribosomal protein S18
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Position: -54
Score: 6.3 Sequence: TAATGACAATCGTTTTCAATA
Locus tag: MSMEG_6069
Name: yciC Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Locus tag: MSMEG_6070
Name: rpmE2 Funciton: 50S ribosomal protein L31 |
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yciC
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Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
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rpmE2
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50S ribosomal protein L31
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Position: -90
Score: 6.1 Sequence: TATCGAAAATGATTTTCAATA
Position: -44
Score: 5.3 Sequence: TAATGCAAACGGTTATCGTTA
Locus tag: MSMEG_6047
Name: znuA Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA
Locus tag: MSMEG_6046
Name: znuC Funciton: Zinc ABC transporter, ATP-binding protein ZnuC
Locus tag: MSMEG_6045
Name: znuB Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB |
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znuA
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Zinc ABC transporter, periplasmic-binding protein ZnuA
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znuC
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Zinc ABC transporter, ATP-binding protein ZnuC
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znuB
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Zinc ABC transporter, inner membrane permease protein ZnuB
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Position: -31
Score: 5.9 Sequence: TAATGATAATCGTTTTCAAAA
Locus tag: MSMEG_6052
Name: znuC2 Funciton: Zinc ABC transporter, ATP-binding protein ZnuC
Locus tag: MSMEG_6053
Name: bluB Funciton: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
Locus tag: MSMEG_6054
Name: lamB Funciton: Conserved hypothetical protein (LamB/YcsF) |
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znuC2
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Zinc ABC transporter, ATP-binding protein ZnuC
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bluB
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Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
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lamB
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Conserved hypothetical protein (LamB/YcsF)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |