Regulon of TPP in Mycobacterium smegmatis str. MC2 155

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Mycobacteriaceae
Under regulation:
- Genes	8
- Operons	3

Member of regulog collections

By taxonomy - Mycobacteriaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -102 Score: 46.8 Sequence: ACGGGCAACACGGGA... Locus tag: MSMEG_0791 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: MSMEG_0792 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: MSMEG_0793 Name: thiG Funciton: Thiazole biosynthesis protein ThiG
	MSMEG_0791	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	MSMEG_0792	thiS	Sulfur carrier protein ThiS
	MSMEG_0793	thiG	Thiazole biosynthesis protein ThiG
Position: -163 Score: 51.8 Sequence: CAGAGAAAACCGCGG... Locus tag: MSMEG_0826 Name: thiC Funciton: Thiamin biosynthesis protein ThiC Locus tag: MSMEG_0825 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	MSMEG_0826	thiC	Thiamin biosynthesis protein ThiC
	MSMEG_0825	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Position: -105 Score: 58.7 Sequence: GAACAACCCACGCGG... Locus tag: MSMEG_6726 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: MSMEG_6725 Name: ykoD Funciton: ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: MSMEG_6724 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	MSMEG_6726	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	MSMEG_6725	ykoD	ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	MSMEG_6724	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD