Regulon of Cobalamin in Mycobacterium smegmatis str. MC2 155

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Mycobacteriaceae
Under regulation:
- Genes	12
- Operons	5

Member of regulog collections

By taxonomy - Mycobacteriaceae
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -105 Score: 25.1 Sequence: CGGAATCTGGTGAGA... Locus tag: MSMEG_6090 Name: null Funciton: Hypothetical protein Locus tag: MSMEG_6089 Name: cbtA Funciton: Predicted cobalt transporter CbtA Locus tag: MSMEG_6088 Name: phoE Funciton: Probable phosphoglycerate mutase
	MSMEG_6090		Hypothetical protein
	MSMEG_6089	cbtA	Predicted cobalt transporter CbtA
	MSMEG_6088	phoE	Probable phosphoglycerate mutase
Position: -292 Score: 74.2 Sequence: TAGGAAGCCGGTGTG... Locus tag: MSMEG_6649 Name: null Funciton: Hypothetical protein
	MSMEG_6649		Hypothetical protein
Position: -177 Score: 46.4 Sequence: CGTGCGGTATGACAC... Locus tag: MSMEG_6064 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component Locus tag: MSMEG_6063 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component Locus tag: MSMEG_6062 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component
	MSMEG_6064	btuF	Vitamin B12 ABC transporter, B12-binding component
	MSMEG_6063	btuC	Vitamin B12 ABC transporter, permease component
	MSMEG_6062	btuD	Vitamin B12 ABC transporter, ATPase component
Position: -287 Score: 75.5 Sequence: AGTTCCGTGTGCTGT... Locus tag: MSMEG_6638 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	MSMEG_6638	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -130 Score: 38.5 Sequence: CAGGGGAATCCGGTG... Locus tag: MSMEG_4561 Name: btuF2 Funciton: Vitamin B12 ABC transporter, B12-binding component Locus tag: MSMEG_4560 Name: btuF2 Funciton: Vitamin B12 ABC transporter, B12-binding component Locus tag: MSMEG_4559 Name: btuC2 Funciton: Vitamin B12 ABC transporter, permease component Locus tag: MSMEG_4557 Name: btuD2 Funciton: Vitamin B12 ABC transporter, ATPase component
	MSMEG_4561	btuF2	Vitamin B12 ABC transporter, B12-binding component
	MSMEG_4560	btuF2	Vitamin B12 ABC transporter, B12-binding component
	MSMEG_4559	btuC2	Vitamin B12 ABC transporter, permease component
	MSMEG_4557	btuD2	Vitamin B12 ABC transporter, ATPase component

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD