Regulons of Caulobacter segnis ATCC 21756

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BglR2	Beta-glucoside; Glucose	Beta-glucosides utilization	3	3
TF	BglR3	Beta-glucoside; Glucose	Beta-glucosides utilization	2	2
TF	CC1627		Sugar utilization	4	3
TF	FixJ	Oxygen	Oxidative stress response	1	2
TF	FixK	Oxygen	Oxidative stress response; Nitrogen fixation	7	8
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	11	10
TF	GluR	Glucose	Carbohydrate metabolism	6	6
TF	HrcA	Heat shock	Heat shock response	1	1
TF	HutC	cis-Urocanic acid	Histidine utilization	2	2
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	LexA	DNA damage	SOS response	12	12
TF	LiuR		Branched-chain amino acid degradation	3	3
TF	NadQ		NAD biosynthesis	3	4
TF	NagQ	N-acetylglucosamine	N-acetylglucosamine utilization	5	4
TF	NnrR	Nitric oxide	Denitrification	5	6
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	3	6
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	4	2
TF	PdxQ2		Metabolite transport; Pyridoxine/pyridoxal homeostasis	3	3
TF	PhnR		Phosphonate utilization; 2-aminoethylphosphonate utilization	3	4
TF	PsrA	Oleate	Fatty acid degradation	21	21
TF	RutR	Uracil	Pyrimidine utilization	2	2
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	4	4
TF	VanR	Vanillate	Vanillate utilization	2	4
TF	YrdX3			1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	5	5
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	4	3
RNA	Glycine	Glycine	Glycine metabolism	2	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	1	1
RNA	mini-ykkC		Multidrug resistance	1	1
RNA	serC		Serine biosynthesis	1	1
RNA	yybP-ykoY			1	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --