Regulon of LexA in Caulobacter segnis ATCC 21756

Properties
Regulator type:	Transcription factor
TF locus tag:	Cseg_2189
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Caulobacterales
Statistics of regulated genes:
- Genes	12
- Operons	11
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 47 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Caulobacterales
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -32 Score: -0.9 Sequence: AAACAGAAAGGGAAC Locus tag: Cseg_1390 Name: lhr Funciton: ATP-dependent RNA helicase, DEAD/DEAH family Locus tag: Cseg_1389 Name: PF00149 Funciton: Conserved hypothetical protein
	Cseg_1390	lhr	ATP-dependent RNA helicase, DEAD/DEAH family
	Cseg_1389	PF00149	Conserved hypothetical protein
Position: -78 Score: 5.4 Sequence: GTTCGTTTTTCGTTC Locus tag: Cseg_4018 Name: PF01078 Funciton: ComM-related protein
	Cseg_4018	PF01078	ComM-related protein
Position: -161 Score: 0.1 Sequence: GAACAAAACCGGAAT Position: -143 Score: -0.2 Sequence: GAACAAAACAAGAAA Locus tag: Cseg_2214 Name: dnaE Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	Cseg_2214	dnaE	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -53 Score: 4.8 Sequence: GTTCCGCTTTCGTTC Locus tag: Cseg_4159 Name: COG5529 Funciton: Conserved hypothetical protein
	Cseg_4159	COG5529	Conserved hypothetical protein
Position: -36 Score: 5.1 Sequence: GTTTGCGGTTTGTTC Locus tag: Cseg_2189 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	Cseg_2189	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -93 Score: 5.4 Sequence: GTTCGCATCTTGTTC Locus tag: Cseg_1102 Name: uvrA Funciton: Excinuclease ABC subunit A
	Cseg_1102	uvrA	Excinuclease ABC subunit A
Position: -32 Score: 5.3 Sequence: GTTCCCATTATGTTC Locus tag: Cseg_2927 Name: nth Funciton: Endonuclease III (EC 4.2.99.18)
	Cseg_2927	nth	Endonuclease III (EC 4.2.99.18)
Position: -62 Score: 5.2 Sequence: GATCCCGTTTCGTTC Locus tag: Cseg_1444 Name: recN Funciton: DNA repair protein RecN
	Cseg_1444	recN	DNA repair protein RecN
Position: -122 Score: 1.8 Sequence: GAACATCTTGCGAAC Locus tag: Cseg_1175 Name: recA Funciton: Recombinase A
	Cseg_1175	recA	Recombinase A
Position: -41 Score: 4.9 Sequence: GTTCCCTTTCTGTTT Locus tag: Cseg_1391 Name: yoaA Funciton: DinG family ATP-dependent helicase YoaA
	Cseg_1391	yoaA	DinG family ATP-dependent helicase YoaA
Position: -28 Score: 1 Sequence: GAACAAAGCTGGAAC Locus tag: Cseg_0204 Name: PF06319 Funciton: Conserved hypothetical protein
	Cseg_0204	PF06319	Conserved hypothetical protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Caulobacter segnis ATCC 21756

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --