Regulon of PhnR in Caulobacter segnis ATCC 21756
| Regulator type: | Transcription factor |
| TF locus tag: | Cseg_3203 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Phosphonate utilization; 2-aminoethylphosphonate utilization |
| Effector: | |
| Regulog: | PhnR - Caulobacterales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PhnR
- By taxonomy - Caulobacterales
- By TF family - GntR/Others
- By pathway - Phosphonate utilization
- By pathway - 2-aminoethylphosphonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -40
Score: 6 Sequence: AATCTGGTCTATACCAAACT
Locus tag: Cseg_3204
Name: COG3511 Funciton: phospholipase C, phosphocholine-specific
Locus tag: Cseg_3205
Name: COG4341 Funciton: Predicted HD phosphohydrolase |
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COG3511
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phospholipase C, phosphocholine-specific
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COG4341
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Predicted HD phosphohydrolase
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Position: -151
Score: 5.8 Sequence: AGTTTGGTATAGACCAGATT
Locus tag: Cseg_3203
Name: phnR Funciton: 2-aminoethylphosphonate uptake and metabolism regulator, GntR family
Locus tag: Cseg_3202
Name: Cseg_3202 Funciton: conserved membrane protein, probable transporter |
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phnR
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2-aminoethylphosphonate uptake and metabolism regulator, GntR family
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Cseg_3202
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conserved membrane protein, probable transporter
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Position: -208
Score: 5.1 Sequence: GATTTGGTATAGTCCAAAAT
Position: -37
Score: 4.6 Sequence: CCACTGGTCCATACCAGAGT
Locus tag: Cseg_3212
Name: omp Funciton: TonB-dependent receptor
Locus tag: Cseg_3211
Name: Cseg_3211 Funciton: hypothetical protein
Locus tag: Cseg_3210
Name: Cseg_3210 Funciton: aspartyl/asparaginyl beta-hydroxylase
Locus tag: Cseg_3209
Name: Cseg_3209 Funciton: TPR repeat-containing protein
Locus tag: Cseg_3208
Name: Cseg_3208 Funciton: aspartyl/asparaginyl beta-hydroxylase
Locus tag: Cseg_3207
Name: Cseg_3207 Funciton: FAD dependent oxidoreductase
Locus tag: Cseg_3206
Name: phnX Funciton: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) |
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omp
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TonB-dependent receptor
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Cseg_3211
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hypothetical protein
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Cseg_3210
|
aspartyl/asparaginyl beta-hydroxylase
|
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Cseg_3209
|
TPR repeat-containing protein
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Cseg_3208
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aspartyl/asparaginyl beta-hydroxylase
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Cseg_3207
|
FAD dependent oxidoreductase
|
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phnX
|
Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |