Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PsrA in Caulobacter segnis ATCC 21756

Properties
Regulator type: Transcription factor
TF locus tag: Cseg_1350
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Regulog: PsrA - Caulobacterales
Statistics of regulated genes:
- Genes 30
- Operons 19
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 70 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -34
Score: 5.1
Sequence: ATTCAAACTAATGTTTTAAC
Locus tag: Cseg_0226
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Cseg_0226
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -166
Score: 4.8
Sequence: ACTGAAACTATCGTTCGAAT
Position: -52
Score: 4.8
Sequence: TCTCAAACGGTTGTTCAAGC
Locus tag: Cseg_0771
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: Cseg_0772
Name: fadD
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Cseg_0771
fadB
Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Cseg_0772
fadD
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -68
Score: 4.8
Sequence: CGACGAACGCGCGTTTGACG
Locus tag: Cseg_0869
Name: null
Funciton: Bll1370 protein
Cseg_0869
Bll1370 protein
Position: -28
Score: 5.3
Sequence: ATTCAAACAAACGTTTAGGG
Locus tag: Cseg_3639
Name: null
Funciton: Oxidoreductase, short-chain dehydrogenase/reductase family
Cseg_3639
Oxidoreductase, short-chain dehydrogenase/reductase family
Position: -28
Score: 5.2
Sequence: ATCCGAACAACCGTTCGAAA
Locus tag: Cseg_1354
Name: null
Funciton: Bll6692 protein
Cseg_1354
Bll6692 protein
Position: -113
Score: 5
Sequence: CGGCGAACGAGCGTTTGAAT
Locus tag: Cseg_1384
Name: null
Funciton: Acyl-CoA dehydrogenase family protein
Locus tag: Cseg_1383
Name: null
Funciton: DSBA oxidoreductase
Locus tag: Cseg_1382
Name: null
Funciton: Acyl-CoA dehydrogenase family protein
Cseg_1384
Acyl-CoA dehydrogenase family protein
Cseg_1383
DSBA oxidoreductase
Cseg_1382
Acyl-CoA dehydrogenase family protein
Position: -27
Score: 5.6
Sequence: CCTCAAACAATTGTTTGAGG
Locus tag: Cseg_0190
Name: null
Funciton: HAD-superfamily hydrolase
Locus tag: Cseg_0191
Name: phhB
Funciton: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
Cseg_0190
HAD-superfamily hydrolase
Cseg_0191
phhB
Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
Position: -40
Score: 5.6
Sequence: ATTCAAACTCGCGTTTGAAT
Locus tag: Cseg_0192
Name: null
Funciton: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase
Cseg_0192
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase
Position: -45
Score: 5.4
Sequence: GGTCATACGATCGTTTGAAA
Locus tag: Cseg_3348
Name: echH
Funciton: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Cseg_3348
echH
Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Position: -26
Score: 5.1
Sequence: TTTCAAACGATCGTTAGCCT
Locus tag: Cseg_0614
Name: paaI
Funciton: Phenylacetic acid degradation protein paaI
Locus tag: Cseg_0615
Name: null
Funciton: alpha/beta hydrolase fold protein
Cseg_0614
paaI
Phenylacetic acid degradation protein paaI
Cseg_0615
alpha/beta hydrolase fold protein
Position: -30
Score: 4.9
Sequence: CCCCCAACGATCGTTTGAAT
Locus tag: Cseg_2255
Name: null
Funciton: acetyl-CoA acetyltransferase
Locus tag: Cseg_2254
Name: null
Funciton: phosphoglycerate mutase family protein
Locus tag: Cseg_2253
Name: null
Funciton: YjeF protein, function unknown
Cseg_2255
acetyl-CoA acetyltransferase
Cseg_2254
phosphoglycerate mutase family protein
Cseg_2253
YjeF protein, function unknown
Position: -31
Score: 5.1
Sequence: AACCAAACACGCGTTTGAGG
Locus tag: Cseg_1333
Name: null
Funciton: Oxidoreductase, short chain dehydrogenase/reductase family
Locus tag: Cseg_1332
Name: fadL
Funciton: Long-chain fatty acid transport protein
Cseg_1333
Oxidoreductase, short chain dehydrogenase/reductase family
Cseg_1332
fadL
Long-chain fatty acid transport protein
Position: -31
Score: 5.3
Sequence: ATCCAAACAAATGTTTGGGA
Locus tag: Cseg_3353
Name: null
Funciton: aldehyde dehydrogenase
Cseg_3353
aldehyde dehydrogenase
Position: -52
Score: 4.9
Sequence: AAGAAAACAATTGTTTGGCT
Position: -34
Score: 5.2
Sequence: CTTAAAACACCTGTTTGGCC
Locus tag: Cseg_3655
Name: null
Funciton: Methylsuccinyl-CoA dehydrogenase, predicted by (Erb et al, 2007)
Cseg_3655
Methylsuccinyl-CoA dehydrogenase, predicted by (Erb et al, 2007)
Position: -46
Score: 5.9
Sequence: CTTCAAACAAGTGTTTGACA
Locus tag: Cseg_3689
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Cseg_3689
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -87
Score: 5.2
Sequence: TTCCAAACGGTCGTTCGACC
Locus tag: Cseg_1597
Name: null
Funciton: Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.99.13)
Locus tag: Cseg_1598
Name: null
Funciton: Acyl-CoA dehydrogenase family protein
Cseg_1597
Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.99.13)
Cseg_1598
Acyl-CoA dehydrogenase family protein
Position: -27
Score: 5.1
Sequence: TGTCAAACGAGTGTTCGGGA
Locus tag: Cseg_2635
Name: null
Funciton: Beta-lactamase class C and other penicillin binding proteins
Locus tag: Cseg_2634
Name: null
Funciton: NADP-dependent quinone oxidoreductase, putative
Locus tag: Cseg_2633
Name: fabL
Funciton: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE (fabL) (NADPH) (EC 1.3.1.9)
Cseg_2635
Beta-lactamase class C and other penicillin binding proteins
Cseg_2634
NADP-dependent quinone oxidoreductase, putative
Cseg_2633
fabL
ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE (fabL) (NADPH) (EC 1.3.1.9)
Position: -39
Score: 5.3
Sequence: CTTCAAACAAGCGTTCAAGA
Locus tag: Cseg_0314
Name: null
Funciton: Short-chain dehydrogenase/reductase SDR
Cseg_0314
Short-chain dehydrogenase/reductase SDR
Position: -64
Score: 5.2
Sequence: GTCAAAACAGATGTTTGACA
Locus tag: Cseg_3758
Name: null
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Cseg_3758
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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