Regulons of Bacteroides dorei DSM 17855

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AraR	Arabinose	Arabinose utilization	3	2
TF	ArgR	Arginine	Arginine biosynthesis	1	1
TF	Crp			18	10
TF	FucR	Fucose	Fucose utilization	1	1
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	1	1
TF	HTCS_Ara-1	Arabinan	Arabinan utilization	2	2
TF	HTCS_Ara-2	Pectic galactan	Arabinan utilization	2	1
TF	HTCS_Fru	Fructose	Fructosides utilization; Fructose utilization	1	1
TF	HTCS_Rgu-1	Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides	Rhamnogalacturonides utilization	4	4
TF	HTCS_Rgu-2		Rhamnogalacturonides utilization	11	8
TF	HcpR	Nitric oxide	Nitrosative stress response	2	2
TF	KdgR	2-keto-3-deoxygluconate	Glucuronate utilization; Galacturonate utilization	4	6
TF	LgoR	L-galactose	L-galactose utilization	3	2
TF	NanR	N-acetylglucosamine; N-acetylneuraminic acid	Sialic acid utilization; N-acetylglucosamine utilization	5	6
TF	PerR	Hydrogen peroxide	Peroxide stress response; Oxidative stress response	7	7
TF	RhaR	Rhamnose	Rhamnose utilization	2	1
TF	SusR		Starch utilization	2	4
TF	XylR	Xylose	Xylose utilization	5	6
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	4	3
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	13	8
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --