Regulons of Bacteroides dorei DSM 17855
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
AraR |
Arabinose |
Arabinose utilization |
3 |
2 |
| TF |
ArgR |
Arginine |
Arginine biosynthesis |
1 |
1 |
| TF |
Crp |
|
|
18 |
10 |
| TF |
FucR |
Fucose |
Fucose utilization |
1 |
1 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
1 |
1 |
| TF |
HTCS_Ara-1 |
Arabinan |
Arabinan utilization |
2 |
2 |
| TF |
HTCS_Ara-2 |
Pectic galactan |
Arabinan utilization |
2 |
1 |
| TF |
HTCS_Fru |
Fructose |
Fructosides utilization; Fructose utilization |
1 |
1 |
| TF |
HTCS_Rgu-1 |
Rhamogalacturonate oligosaccharides; Galacturonate oligosaccharides |
Rhamnogalacturonides utilization |
4 |
4 |
| TF |
HTCS_Rgu-2 |
|
Rhamnogalacturonides utilization |
11 |
8 |
| TF |
HcpR |
Nitric oxide |
Nitrosative stress response |
2 |
2 |
| TF |
KdgR |
2-keto-3-deoxygluconate |
Glucuronate utilization; Galacturonate utilization |
4 |
6 |
| TF |
LgoR |
L-galactose |
L-galactose utilization |
3 |
2 |
| TF |
NanR |
N-acetylglucosamine; N-acetylneuraminic acid |
Sialic acid utilization; N-acetylglucosamine utilization |
5 |
6 |
| TF |
PerR |
Hydrogen peroxide |
Peroxide stress response; Oxidative stress response |
7 |
7 |
| TF |
RhaR |
Rhamnose |
Rhamnose utilization |
2 |
1 |
| TF |
SusR |
|
Starch utilization |
2 |
4 |
| TF |
XylR |
Xylose |
Xylose utilization |
5 |
6 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
4 |
3 |
| RNA |
Cobalamin |
Adenosylcobalamin |
Cobalamin biosynthesis |
13 |
8 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
3 |
1 |
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