# RNA - TPP
>BACDOR_02485(thiS) Score=68.9 Pos=-169 [Bacteroides dorei DSM 17855]
TCGTAAAACAAAGGGGTGCCCCACGTAAACAGCGGACGGGCTGAGATTATACCCTGTGAACCTGATGCGGTTAGTACCGCCGAAGGGATTGTTACTTCTTACCTC
# RNA - Cobalamin
>BACDOR_02869(btuB5) Score=77 Pos=-330 [Bacteroides dorei DSM 17855]
ATCTTTGCAACAGAATTAGTAATCGGGCTATCACATAGCCCGATGCAAGGGAATCCGGTGTAAATCCGGGGCTGTACCTGCAGCTGTAAATCCTCATTATGTTGATTGGATAGTCCAAAACCACTGTTTCATTTGAAGAAATGGGAAGGTTTCCAATCAGAGGAAAGCCAGAATACCTGCTAAGTCTGTTGAACAATAAAC
>BACDOR_02878(nrdA) Score=88.7 Pos=-274 [Bacteroides dorei DSM 17855]
ATCTTTGTTCCCGAATCGGTTCCGAATAGATGCCCTCTATCCGGATTAAAAGGGAATCGGGTGTAAATCCCGGACAGTCCCGCTGCTGTGAAACTCCGATAAAATTTCCGATATGTACCTATTGCCACTGCCTGACTCCACATAACGAGAACGCGGGAAGGCATCGGAAATGAGGAGCCAGTCAGAAGACCTGCCATTCATCAAAGGCCGTTTCT
>BACDOR_02872(nrdD2) Score=94.3 Pos=-350 [Bacteroides dorei DSM 17855]
TAACTTTGTCAGTAATATCGGTTTCCGGATTAGCCGTTGGCGCGAAACGGAATTAAAAGGGAATCCTGTGCAAATCAGGAACTATCCCCGTAGCTGTAAGTTTTATCCTCCCATAGTGTGGGGAAGTGTTGTGACATTCTTAGCCACTGGTTATTGTGAAAACCGGGAAGGCGTTACAACGGAAACAAGTCAGAAGACCTGCCGTTATTGTTTATATCATT
>BACDOR_02883(btuB4) Score=84.2 Pos=-257 [Bacteroides dorei DSM 17855]
ACCTTTGCATCAGATTTGGTGATGTAAGTACTTTCCGTATTTGCATAAAAGGGAATTCGGTTATAGAATCCGAAGCAGTGCCCGCTACTGTGAAGCCCGTCCAATGAAAAGCAACTCTCGCCATGCCACTGTTTCCTTTGTAAGAAATGGGAAGGCGCTTTTCAGGGTGAAGCCAGGAAACCTGCCAAGTCTGAACATAGATAATT
>BACDOR_02868(btuB4) Score=88.8 Pos=-259 [Bacteroides dorei DSM 17855]
ACCTTTGCGCCCGGTTTGGTGATACAGATATTTTTTCTCTATCTGTATAAAAGGGAATTCGGTTGTGGAATCCGAAGCAGTGCCCGCTACTGTGAAACCCATTTGATGAAAAGCAACTCTCGCTATGCCACTGTTTCGAAAATGAAGAAATGGGAAGGCGCTTTTCAGGGTGAAGCCAGGAAACCTGCCAAATCAAAACATAGATAATC
>BACDOR_03419(btuB1) Score=84.9 Pos=-294 [Bacteroides dorei DSM 17855]
AACTATCTTTGCCACGTTTTGTTCCGCGTACCTCCGACTGATGCGAGGAAGCGGATGAAAAGGGAATCAGGTGCAAGTCCTGAACAGTCCCGCTGCTGTAAGCTCCATCTACCCCTATAAGGGGATAGGTTTATTTATCCACTCACGCCACTGCCTGTATATATAATTAAGGTGGGAAGGCAAGTAAACAGGAGTAAGTCAGAAGACCTGCAAAACGTAAAGTCATCGAC
>BACDOR_00281(nrdD) Score=91 Pos=-214 [Bacteroides dorei DSM 17855]
CTTTGTAGCCGTCCGACAAGGTGAAGTTAACCCCTTCTAAGAGGGAATGCCGTGAAAATCAGCAACAGTACCCGCTGCTGTAATTCTCGTTGAACTGAAACAATATGCCACTACAAAACTATTTGCGGGAAGGCGTTTTAAGGGAGAGATAAGTCAGAAAACCTGCCTGGAAGGACAGCCAAGTT
>BACDOR_00736(BT1483) Score=97.4 Pos=1780 [Bacteroides dorei DSM 17855]
TGTATCTTTGCGGTGCATCGGTTCATTTATCTCCCCTCCGAGGTGAATGATTAAAAGGGAATCAAGGTGAGAATCCTGAACAGTCCCGCTGCTGTATGTTTCACTAAACGCATAAGCAAAATGCCAATAACCACTGGGATAATTTCCGGGAAGGTGCTTATAGCGGAAACGAGTCAGAAGACCTGCCTGTGCATTTATCAAATCT
# TF - HTCS_Rgu-1: BACDOR_03254
>BACDOR_03278(rhiN) Score=9.4 Pos=-105 [Bacteroides dorei DSM 17855]
CAAATAATACAC---------TGAAAAGTGCAC
>BACDOR_03257(plyC4) Score=8.9 Pos=-106 [Bacteroides dorei DSM 17855]
TAAAATATACGA---------CAAATATTACAA
>BACDOR_03276(susC_Rgu-1) Score=9 Pos=-124 [Bacteroides dorei DSM 17855]
TAATAAATCCAC---------TAAAAACTACAC
>BACDOR_03070(pehX1) Score=9.5 Pos=-237 [Bacteroides dorei DSM 17855]
CAAAAAATCCAC---------CAAATAGTGCAC
# TF - HTCS_Ara-1: BACDOR_01717
>BACDOR_01719(susC_Ara-3) Score=7.5 Pos=-291 [Bacteroides dorei DSM 17855]
CGTCCACCCTATAAAACCGTTTGTCCACCC
>BACDOR_01716(abn2) Score=7.4 Pos=-159 [Bacteroides dorei DSM 17855]
TGTCCACCCTTTAAGCGATATTGTCCACCT
# TF - HTCS_Fru: BACDOR_00294
>BACDOR_00290(BF3178) Score=8.1 Pos=-28 [Bacteroides dorei DSM 17855]
GAAACAAAA------------GTAACAAAT
# TF - Fur: BACDOR_03374
>BACDOR_04439(feoB) Score=6.4 Pos=-71 [Bacteroides dorei DSM 17855]
ATTTAAAAACAATCTAAAT
# TF - Zur: BACDOR_03935
>BACDOR_04615(copA) Score=5.7 Pos=-69 [Bacteroides dorei DSM 17855]
TTGCAACAAGATTGCAT
>BACDOR_03936(zntA) Score=5.8 Pos=-58 [Bacteroides dorei DSM 17855]
TTGCAATTTAGTTGCAT
>BACDOR_03390(czcB) Score=5.3 Pos=-141 [Bacteroides dorei DSM 17855]
CCGCAACTTTGTTGCAT
# TF - ArgR: BACDOR_01176
>BACDOR_01176(argR) Score=5.8 Pos=-18 [Bacteroides dorei DSM 17855]
TTAGAATAATTATGCAGT
# TF - KdgR: BACDOR_02922
>BACDOR_03279(sgcC) Score=4.5 Pos=-25 [Bacteroides dorei DSM 17855]
TTCGTGTGCGAAAACGGT
>BACDOR_03279(sgcC) Score=4.5 Pos=-3 [Bacteroides dorei DSM 17855]
TTTGTGCACGATAACGAT
>BACDOR_02921(kdgK) Score=5.5 Pos=-228 [Bacteroides dorei DSM 17855]
ATTGTGCTCGTACACACT
>BACDOR_02921(kdgK) Score=5.4 Pos=-145 [Bacteroides dorei DSM 17855]
TTTGTGCACGCACACGGA
>BACDOR_02922(kdgR) Score=5.4 Pos=-115 [Bacteroides dorei DSM 17855]
TCCGTGTGCGTGCACAAA
>BACDOR_02922(kdgR) Score=5.5 Pos=-32 [Bacteroides dorei DSM 17855]
AGTGTGTACGAGCACAAT
# TF - LgoR: BACDOR_04896
>BACDOR_00330(lgoD) Score=6.3 Pos=-102 [Bacteroides dorei DSM 17855]
TACGCAAAGGTTTACGTA
>BACDOR_00441(GH43) Score=5.6 Pos=-113 [Bacteroides dorei DSM 17855]
TACGCAAAGGTTTGCGTG
# TF - FucR: BACDOR_02265
>BACDOR_02265(fucR) Score=6.2 Pos=-59 [Bacteroides dorei DSM 17855]
CTTTGCATCGGGACAGTTCAGCACAG
# TF - XylR: BACDOR_00865
>BACDOR_00865(xylR) Score=4.9 Pos=-70 [Bacteroides dorei DSM 17855]
CATATTGTATAATAGATGATATT
>BACDOR_00759(xylE) Score=5.9 Pos=-41 [Bacteroides dorei DSM 17855]
GTTATTGTATTTATTACGAAAAC
>BACDOR_00865(xylR) Score=5.1 Pos=-103 [Bacteroides dorei DSM 17855]
TATATTGTAGTGTATATGATAAG
>BACDOR_01992(GH3_Xyl) Score=5.6 Pos=-110 [Bacteroides dorei DSM 17855]
CTTTTCGTACAAAAAACAATATC
>BACDOR_04539(SSF48208) Score=4.6 Pos=-91 [Bacteroides dorei DSM 17855]
ATAATTGTTTTTTAGACAATAAA
>BACDOR_04539(SSF48208) Score=5.1 Pos=-31 [Bacteroides dorei DSM 17855]
ATATTTGTACATTATACAATATC
# TF - AraR: BACDOR_03632
>BACDOR_03634(araM) Score=5.2 Pos=-122 [Bacteroides dorei DSM 17855]
AAAGTGTAGGAAATACACTTT
>BACDOR_03634(araM) Score=5.6 Pos=-59 [Bacteroides dorei DSM 17855]
ATAGTGTTACTTTTACACCCA
# TF - Crp: BACDOR_01607
>BACDOR_03634(araM) Score=5.6 Pos=-104 [Bacteroides dorei DSM 17855]
TTTTATGTTGCACAACATACTC
>BACDOR_02848(serB) Score=6.1 Pos=-116 [Bacteroides dorei DSM 17855]
AAATATGTTATATAGCATAAAA
>BACDOR_01705(PF01694) Score=6.2 Pos=-71 [Bacteroides dorei DSM 17855]
TTTTCTGTTATATAACAGAATA
>BACDOR_04003 Score=4.5 Pos=-33 [Bacteroides dorei DSM 17855]
TTTTAGGTTTAACAAATTAAAA
>BACDOR_00927(PF09719) Score=4.6 Pos=-110 [Bacteroides dorei DSM 17855]
AAAAGTGTTGAATAACATAATT
>BACDOR_02265(fucR) Score=5.1 Pos=-114 [Bacteroides dorei DSM 17855]
TCTTGTGTTATAAAACATACCA
>BACDOR_03939(PF10438) Score=5.4 Pos=-58 [Bacteroides dorei DSM 17855]
AGATATGCTGAAAAACATATAA
>BACDOR_01607(crp) Score=4.1 Pos=-35 [Bacteroides dorei DSM 17855]
ATTTGTGCTCTATAACACGGTT
>BACDOR_00155(susC_Crp-2) Score=5.1 Pos=-338 [Bacteroides dorei DSM 17855]
AGATATGTTCAACAACATACTA
>BACDOR_00865(xylR) Score=4.8 Pos=-34 [Bacteroides dorei DSM 17855]
AATAGTGTTTTAGAACATAATA
# TF - NanR: BACDOR_00695
>BACDOR_01206(susC_Nan-5) Score=4.8 Pos=-163 [Bacteroides dorei DSM 17855]
GTTATAATAAAATATTTTTGTTT
>BACDOR_01206(susC_Nan-5) Score=5 Pos=-160 [Bacteroides dorei DSM 17855]
ATAATAAAATATTTTTGTTTATA
>BACDOR_00694(nanA) Score=5.5 Pos=-111 [Bacteroides dorei DSM 17855]
TTATTAATAAATAAATTTAGTTT
>BACDOR_00694(nanA) Score=4.8 Pos=-40 [Bacteroides dorei DSM 17855]
TAAGTAATATAAAATATTCATTT
>BACDOR_00663(nanH) Score=4.8 Pos=-47 [Bacteroides dorei DSM 17855]
ATTTCAATAAAAACTTTTATTTT
>BACDOR_00695(nanR) Score=5.5 Pos=-217 [Bacteroides dorei DSM 17855]
AAACTAAATTTATTTATTAATAA
# TF - HcpR: BACDOR_04542
>BACDOR_04541(hcp) Score=6.1 Pos=-35 [Bacteroides dorei DSM 17855]
CTGTAACATATGGTACAA
>BACDOR_04542(hcpR) Score=6.1 Pos=-49 [Bacteroides dorei DSM 17855]
TTGTACCATATGTTACAG
# TF - PerR: BACDOR_03683
>BACDOR_01950(rbr2) Score=6.7 Pos=-93 [Bacteroides dorei DSM 17855]
ATAATTGTAATGAATACAATTTT
>BACDOR_03683(perR) Score=6.1 Pos=-30 [Bacteroides dorei DSM 17855]
AAAATTGTAATAGTTACAAAAAG
>BACDOR_03102(acn) Score=5.9 Pos=-25 [Bacteroides dorei DSM 17855]
AAAACTGTAATAATTATAAATTG
>BACDOR_00877(tpx) Score=5.7 Pos=-44 [Bacteroides dorei DSM 17855]
AAATTTGTTATCATTACAGTATC
>BACDOR_04898(ahpC) Score=6 Pos=-55 [Bacteroides dorei DSM 17855]
GCAAATGTAATAATTACAATTTA
>BACDOR_04357(ftn) Score=5.7 Pos=-41 [Bacteroides dorei DSM 17855]
ATATTTGCAACAGTTACAATTTA
>BACDOR_04415(BT1211) Score=5.9 Pos=-34 [Bacteroides dorei DSM 17855]
TTCTTTGTAATTATTACAACTTT
# TF - HTCS_Rgu-2: BACDOR_00410
>BACDOR_00395(rhaH) Score=8.9 Pos=-108 [Bacteroides dorei DSM 17855]
TGAACGAATAAACA------TGAATGAATTTCTA
>BACDOR_00405(BT2958) Score=9.3 Pos=-85 [Bacteroides dorei DSM 17855]
TGGACGAATTTCCA------TGTATCTTATTCTA
>BACDOR_00375(ramA) Score=9.6 Pos=-88 [Bacteroides dorei DSM 17855]
TGAACAATATTCCA------TGAATAAAATTCCA
>BACDOR_03323(BT4156) Score=9.2 Pos=-69 [Bacteroides dorei DSM 17855]
TGTATCATTTTTCA------TGTATGATTTTCCA
>BACDOR_00368(bguA) Score=9.3 Pos=-94 [Bacteroides dorei DSM 17855]
TATACGAATTTCCA------TGTACTTCTTTCTA
>BACDOR_00393(BT2680) Score=9 Pos=-87 [Bacteroides dorei DSM 17855]
TGAACGAATTTCTA------TGTATCTTATTCTA
>BACDOR_00371(rhiN2) Score=8.7 Pos=-91 [Bacteroides dorei DSM 17855]
TGCATAATATTCAA------TGTACACATTTCCA
>BACDOR_01719(susC_Ara-3) Score=7.7 Pos=-118 [Bacteroides dorei DSM 17855]
TAGAGTATTCAACA------TGTACAATAATCCA
# TF - SusR: BACDOR_02287
>BACDOR_02286(susA) Score=5.2 Pos=-167 [Bacteroides dorei DSM 17855]
CGTTTATATTTTCA
>BACDOR_02286(susA) Score=5.8 Pos=-100 [Bacteroides dorei DSM 17855]
CATTTATATTTTTA
>BACDOR_02280(susC) Score=5.6 Pos=-193 [Bacteroides dorei DSM 17855]
CATTTATATTTTTT
>BACDOR_02280(susC) Score=5.8 Pos=-116 [Bacteroides dorei DSM 17855]
CATTTATATTTTTA
# TF - RhaR: BACDOR_01166
>BACDOR_01175(rhaB) Score=7.1 Pos=-100 [Bacteroides dorei DSM 17855]
CCAAATC--------------TCAAAAA
# TF - HTCS_Ara-2: BACDOR_04890
>BACDOR_04891(BVU_0840) Score=9.8 Pos=-133 [Bacteroides dorei DSM 17855]
TGCAAGATTT------------TGCAAGATTT