Regulon of HTCS_Ara-1 in Bacteroides dorei DSM 17855
| Regulator type: | Transcription factor |
| TF locus tag: | BACDOR_01717 |
| Regulator family: | [Other] |
| Regulation mode: | activator |
| Biological process: | Arabinan utilization |
| Effector: | Arabinan |
| Regulog: | HTCS_Ara-1 - Bacteroidaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - [Other]
- By effector - Arabinan
- By pathway - Arabinan utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -291
Score: 7.5 Sequence: CGTCCACCCTATAAAACCGTTTGTCCACCC
Locus tag: BACDOR_01719
Name: susC_Ara-3 Funciton: TonB-dependent outer membrane transporter of arabinan oligosaccharides
Locus tag: BACDOR_01720
Name: susD_Ara-3 Funciton: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
Locus tag: BACDOR_01721
Name: null Funciton: hypothetical protein
Locus tag: BACDOR_01722
Name: abn3 Funciton: Arabinan endo-1,5-alpha-L-arabinosidase |
|||
|
susC_Ara-3
|
TonB-dependent outer membrane transporter of arabinan oligosaccharides
|
||
|
susD_Ara-3
|
Outer membrane polysaccharide binding protein for arabinan oligosaccharides
|
||
|
hypothetical protein
|
|||
|
abn3
|
Arabinan endo-1,5-alpha-L-arabinosidase
|
||
|
Position: -159
Score: 7.4 Sequence: TGTCCACCCTTTAAGCGATATTGTCCACCT
Locus tag: BACDOR_01716
Name: abn2 Funciton: Arabinan endo-1,5-alpha-L-arabinosidase
Locus tag: BACDOR_01715
Name: abf2 Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55) |
|||
|
abn2
|
Arabinan endo-1,5-alpha-L-arabinosidase
|
||
|
abf2
|
Alpha-N-arabinofuranosidase (EC 3.2.1.55)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |