Profile of regulator HTCS_Ara-1 in Bacteroidaceae
Properties
| Regulator family: |
[Other] |
| Regulation mode: |
activator |
| Biological process: |
Arabinan utilization |
| Effector: |
Arabinan |
| Regulog: |
HTCS_Ara-1 - Bacteroidaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Bacteroides cellulosilyticus DSM 14838
|
|
BACCELL_05304 |
abn2 |
-268 |
7.8 |
TGTCCACCTCAAATGTTCATTTGTCCACCT |
|
Bacteroides dorei DSM 17855
|
|
BACDOR_01719 |
susC_Ara-3 |
-291 |
7.5 |
CGTCCACCCTATAAAACCGTTTGTCCACCC |
|
BACDOR_01716 |
abn2 |
-159 |
7.4 |
TGTCCACCCTTTAAGCGATATTGTCCACCT |
|
Bacteroides eggerthii DSM 20697
|
|
BACEGG_01542 |
abn2 |
-285 |
7.4 |
TGTCCACCTTAAAAGGTCATATATCCACCT |
|
BACEGG_01540 |
susC_Ara-3 |
-328 |
7.3 |
TATCCACCTCTAAAACCCATTTGTCCACCC |
|
BACEGG_01540 |
susC_Ara-3 |
-349 |
6.4 |
TCTCTACACTTAAAATTCGTTTATCCACCT |
|
Bacteroides plebeius DSM 17135
|
|
BACPLE_00643 |
susC_Ara-3 |
-224 |
7.8 |
TATCCACCTATAAAATTCGTTTGTCCACCT |
|
BACPLE_00641 |
abf2 |
-153 |
6.8 |
TGTCCACCCAATAGAAAAATTTGTCCACCT |
|
Bacteroides thetaiotaomicron VPI-5482
|
|
BT0365 |
lamG |
-136 |
7.6 |
TATCCACCTCGAAAATTCATTTGTCCACCT |
|
BT0367 |
abn2 |
-69 |
7 |
TGTCCACCAATCGTGTTCGTATGTCCACCT |
|
Bacteroides vulgatus ATCC 8482
|
|
BVU_1005 |
susC_Ara-3 |
-265 |
7.5 |
CGTCCACCCTATAAAACCGTTTGTCCACCC |
|
BVU_1002 |
abn2 |
-169 |
7.4 |
TGTCCACCCTTTAAGCGATATTGTCCACCT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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