Regulon of Cobalamin in Bacteroides dorei DSM 17855

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Bacteroidaceae
Under regulation:
- Genes	18
- Operons	8

Member of regulog collections

By taxonomy - Bacteroidaceae
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -257 Score: 84.2 Sequence: ACCTTTGCATCAGAT... Locus tag: BACDOR_02883 Name: btuB4 Funciton: B12-regulated TonB-dependent outer membrane receptor Locus tag: BACDOR_02884 Name: btuF1 Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF1
	BACDOR_02883	btuB4	B12-regulated TonB-dependent outer membrane receptor
	BACDOR_02884	btuF1	Vitamin B12 ABC transporter, B12-binding component BtuF1
Position: -259 Score: 88.8 Sequence: ACCTTTGCGCCCGGT... Locus tag: BACDOR_02868 Name: btuB4 Funciton: B12-regulated TonB-dependent outer membrane receptor
	BACDOR_02868	btuB4	B12-regulated TonB-dependent outer membrane receptor
Position: -330 Score: 77 Sequence: ATCTTTGCAACAGAA... Locus tag: BACDOR_02869 Name: btuB5 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: BACDOR_02870 Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
	BACDOR_02869	btuB5	Outer membrane vitamin B12 receptor BtuB
	BACDOR_02870	cbiK	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Position: -274 Score: 88.7 Sequence: ATCTTTGTTCCCGAA... Locus tag: BACDOR_02878 Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) Locus tag: BACDOR_02879 Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
	BACDOR_02878	nrdA	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
	BACDOR_02879	nrdB	Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Position: -350 Score: 94.3 Sequence: TAACTTTGTCAGTAA... Locus tag: BACDOR_02872 Name: nrdD2 Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: BACDOR_02871 Name: nrdG2 Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	BACDOR_02872	nrdD2	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	BACDOR_02871	nrdG2	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -214 Score: 91 Sequence: CTTTGTAGCCGTCCG... Locus tag: BACDOR_00281 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: BACDOR_00280 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	BACDOR_00281	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	BACDOR_00280	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: 1780 Score: 97.4 Sequence: TGTATCTTTGCGGTG... Locus tag: BACDOR_00736 Name: BT1483 Funciton: two-component system sensor histidine kinase
	BACDOR_00736	BT1483	two-component system sensor histidine kinase
Position: -294 Score: 84.9 Sequence: AACTATCTTTGCCAC... Locus tag: BACDOR_03419 Name: btuB1 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: BACDOR_03418 Name: null Funciton: Hypothetical protein Locus tag: BACDOR_03417 Name: null Funciton: Predicted ATP-binding protein Locus tag: BACDOR_03416 Name: btuF1 Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF1 Locus tag: BACDOR_03415 Name: btuC1 Funciton: Vitamin B12 ABC transporter, permease component BtuC1 Locus tag: BACDOR_03414 Name: btuD1 Funciton: Putative vitamin B12 ABC transporter, ATP-binding protein
	BACDOR_03419	btuB1	Outer membrane vitamin B12 receptor BtuB
	BACDOR_03418		Hypothetical protein
	BACDOR_03417		Predicted ATP-binding protein
	BACDOR_03416	btuF1	Vitamin B12 ABC transporter, B12-binding component BtuF1
	BACDOR_03415	btuC1	Vitamin B12 ABC transporter, permease component BtuC1
	BACDOR_03414	btuD1	Putative vitamin B12 ABC transporter, ATP-binding protein

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Cobalamin in Bacteroides dorei DSM 17855

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --