Regulons of Dechloromonas aromatica RCB

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	2	2
TF	Daro_1932			1	1
TF	HrcA	Heat shock	Heat shock response	2	2
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	3	4
TF	LexA	DNA damage	SOS response	6	5
TF	LiuR		Branched-chain amino acid degradation	7	2
TF	LldR	L-lactate	Lactate utilization	2	6
TF	MdcY		Malonate metabolism	2	4
TF	MlnR		Malonate metabolism	7	8
TF	ModE	Molybdate	Molybdenum homeostasis	2	2
TF	NikR	Nickel ion, (Ni2+)	Nickel homeostasis	1	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	1
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	6	7
TF	PsrA	Oleate	Fatty acid degradation	6	4
TF	SdhR		Tricarboxylic acid cycle	8	5
TF	YdcR			3	4
RNA	SAH_riboswitch	S-adenosylhomocysteine	Methionine metabolism	2	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	1	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --