Regulon of LiuR in Dechloromonas aromatica RCB

Properties
Regulator type:	Transcription factor
TF locus tag:	Daro_0102
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Various betaproteobacteria
Statistics of regulated genes:
- Genes	16
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 31 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Various betaproteobacteria
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -51 Score: 6.5 Sequence: GTTGACGTTAACGTAAAC Position: -45 Score: 5.4 Sequence: GTTAACGTAAACGTAAAT Locus tag: Daro_0101 Name: paaI Funciton: Phenylacetic acid degradation-related protein Locus tag: Daro_0100 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) Locus tag: Daro_0099 Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1) Locus tag: Daro_0098 Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) Locus tag: Daro_0097 Name: null Funciton: Permease of the drug/metabolite transporter (DMT) superfamily Locus tag: Daro_0096 Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: Daro_0095 Name: null Funciton: Protein of unknown function DUF88 Locus tag: Daro_0094 Name: null Funciton: 2-hydroxychromene-2-carboxylate isomerase Locus tag: Daro_0093 Name: null Funciton: Lysine decarboxylase family Locus tag: Daro_0092 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: Daro_0091 Name: null Funciton: Transcriptional regulator Locus tag: Daro_0090 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: Daro_0089 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Locus tag: Daro_0088 Name: null Funciton: 5-enolpyruvylshikimate-3-phosphate synthase Locus tag: Daro_0087 Name: fabG Funciton: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) Locus tag: Daro_0086 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
	Daro_0101	paaI	Phenylacetic acid degradation-related protein
	Daro_0100	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
	Daro_0099	cah	Carbonic anhydrase (EC 4.2.1.1)
	Daro_0098	ivdA	Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
	Daro_0097		Permease of the drug/metabolite transporter (DMT) superfamily
	Daro_0096	ivdC	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Daro_0095		Protein of unknown function DUF88
	Daro_0094		2-hydroxychromene-2-carboxylate isomerase
	Daro_0093		Lysine decarboxylase family
	Daro_0092	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	Daro_0091		Transcriptional regulator
	Daro_0090	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	Daro_0089	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	Daro_0088		5-enolpyruvylshikimate-3-phosphate synthase
	Daro_0087	fabG	3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
	Daro_0086	liuE	Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD