Regulon of PsrA in Dechloromonas aromatica RCB

Properties
Regulator type:	Transcription factor
TF locus tag:	Daro_1543
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid degradation
Effector:	Oleate
Regulog:	PsrA - Various betaproteobacteria
Statistics of regulated genes:
- Genes	13
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 34 sites [see more]

Member of regulog collections

By taxonomy - Various betaproteobacteria
By trascription factor - PsrA
By TF family - TetR
By effector - Oleate
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -58 Score: 6 Sequence: ATTCAAACGTTCGTTTTATT Locus tag: Daro_1549 Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Locus tag: Daro_1550 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: Daro_1551 Name: null Funciton: hypothetical protein Locus tag: Daro_1552 Name: null Funciton: FIG026291: Hypothetical periplasmic protein Locus tag: Daro_1553 Name: fadD Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Locus tag: Daro_1554 Name: null Funciton: Dioxygenases related to 2-nitropropane dioxygenase Locus tag: Daro_1555 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Daro_1549	acdB	Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
	Daro_1550	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	Daro_1551		hypothetical protein
	Daro_1552		FIG026291: Hypothetical periplasmic protein
	Daro_1553	fadD	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Daro_1554		Dioxygenases related to 2-nitropropane dioxygenase
	Daro_1555	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -122 Score: 4.7 Sequence: TTTCCAACAGTCATTTGAAT Position: -83 Score: 5.8 Sequence: TTTCAAACGTTTGTTTGAGA Locus tag: Daro_1548 Name: fadL Funciton: Long-chain fatty acid transport protein
	Daro_1548	fadL	Long-chain fatty acid transport protein
Position: -34 Score: 6 Sequence: ATTCAAACGAACGTATGAAT Locus tag: Daro_1543 Name: psrA Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family Locus tag: Daro_1544 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: Daro_1545 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: Daro_1546 Name: null Funciton: DegV family protein Locus tag: Daro_1547 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	Daro_1543	psrA	Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
	Daro_1544	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Daro_1545	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	Daro_1546		DegV family protein
	Daro_1547	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD