Regulon of MdcY in Dechloromonas aromatica RCB

Properties
Regulator type:	Transcription factor
TF locus tag:	Daro_4024
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Malonate metabolism
Effector:
Regulog:	MdcY - Various betaproteobacteria
Statistics of regulated genes:
- Genes	12
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Various betaproteobacteria
By TF family - GntR/Others
By pathway - Malonate metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -70 Score: 4.1 Sequence: TTGTATTCAT Position: -49 Score: 5 Sequence: GTGTATACAA Locus tag: Daro_4024 Name: mdcY Funciton: Transcriptional regulator of malonate metabolism, GntR family
	Daro_4024	mdcY	Transcriptional regulator of malonate metabolism, GntR family
Position: -125 Score: 5 Sequence: TTGTATACAC Position: -104 Score: 4.1 Sequence: ATGAATACAA Locus tag: Daro_4023 Name: matP Funciton: TRAP malonate transporter, periplasmic subunit Locus tag: Daro_4022 Name: matQ Funciton: TRAP malonate transporter, small permease subunit Locus tag: Daro_4021 Name: matM Funciton: TRAP malonate transporter, large permease subunit Locus tag: Daro_4020 Name: mdcA Funciton: Malonate decarboxylase alpha subunit Locus tag: Daro_4019 Name: mdcC Funciton: Malonate decarboxylase delta subunit Locus tag: Daro_4018 Name: mdcD Funciton: Malonate decarboxylase beta subunit Locus tag: Daro_4017 Name: mdcE Funciton: Malonate decarboxylase gamma subunit Locus tag: Daro_4016 Name: mdcG Funciton: Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-) Locus tag: Daro_4015 Name: mdcB Funciton: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25) Locus tag: Daro_4014 Name: mdcH Funciton: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39) Locus tag: Daro_4013 Name: Daro_4013 Funciton: Protein of unknown function DUF81, putative permease
	Daro_4023	matP	TRAP malonate transporter, periplasmic subunit
	Daro_4022	matQ	TRAP malonate transporter, small permease subunit
	Daro_4021	matM	TRAP malonate transporter, large permease subunit
	Daro_4020	mdcA	Malonate decarboxylase alpha subunit
	Daro_4019	mdcC	Malonate decarboxylase delta subunit
	Daro_4018	mdcD	Malonate decarboxylase beta subunit
	Daro_4017	mdcE	Malonate decarboxylase gamma subunit
	Daro_4016	mdcG	Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-)
	Daro_4015	mdcB	Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
	Daro_4014	mdcH	Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
	Daro_4013	Daro_4013	Protein of unknown function DUF81, putative permease

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD