Regulon of MlnR in Dechloromonas aromatica RCB
| Regulator type: | Transcription factor |
| TF locus tag: | Daro_4007 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Malonate metabolism |
| Effector: | |
| Regulog: | MlnR - Various betaproteobacteria |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Various betaproteobacteria
- By TF family - GntR/Others
- By pathway - Malonate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -121
Score: 5.6 Sequence: GCTTCCATAATTATGGATAC
Locus tag: Daro_4006
Name: mutB Funciton: Methylmalonyl-CoA mutase (EC 5.4.99.2)
Locus tag: Daro_4005
Name: meaB Funciton: auxiliary metallochaperone, involved in the protection and assembly of methylmalonyl-CoA mutase
Locus tag: Daro_4004
Name: pccB Funciton: Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3)
Locus tag: Daro_4003
Name: pccA Funciton: Propionyl-CoA carboxylase, alpha subunit |
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mutB
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Methylmalonyl-CoA mutase (EC 5.4.99.2)
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meaB
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auxiliary metallochaperone, involved in the protection and assembly of methylmalonyl-CoA mutase
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pccB
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Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3)
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pccA
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Propionyl-CoA carboxylase, alpha subunit
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Position: -50
Score: 4.8 Sequence: ATCCCTATAATTATGGATTA
Locus tag: Daro_0300
Name: epi Funciton: Methylmalonyl-CoA epimerase (EC 5.1.99.1) |
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epi
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Methylmalonyl-CoA epimerase (EC 5.1.99.1)
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Position: -49
Score: 6 Sequence: TCATTCGTAATTATGAATAC
Locus tag: Daro_1202
Name: ebA7223 Funciton: YhdH, a putative quinone oxidoreductase
Locus tag: Daro_1203
Name: Daro_1330 Funciton: Two-component hybrid sensor and regulator
Locus tag: Daro_1204
Name: prpE Funciton: Propionate-CoA ligase |
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ebA7223
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YhdH, a putative quinone oxidoreductase
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Daro_1330
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Two-component hybrid sensor and regulator
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prpE
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Propionate-CoA ligase
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Position: -120
Score: 4.7 Sequence: TCCTCCCTAATTAATAATTA
Position: -113
Score: 4.3 Sequence: TAATTAATAATTACCGTAAA
Locus tag: Daro_4012
Name: ebA3691 Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) |
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ebA3691
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Enoyl-CoA hydratase (EC 4.2.1.17)
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Position: -33
Score: 4.3 Sequence: TTTACGGTAATTATTAATTA
Position: -26
Score: 4.7 Sequence: TAATTATTAATTAGGGAGGA
Locus tag: Daro_4011
Name: Daro_4011 Funciton: Putative membrane protein, clustering with ActP
Locus tag: Daro_4010
Name: actP Funciton: Acetate permease ActP (cation/acetate symporter) |
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Daro_4011
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Putative membrane protein, clustering with ActP
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actP
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Acetate permease ActP (cation/acetate symporter)
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Position: -29
Score: 5.6 Sequence: GTATCCATAATTATGGAAGC
Locus tag: Daro_4007
Name: mlnR Funciton: Transcriptional regulator of malonate metabolism, GntR family |
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mlnR
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Transcriptional regulator of malonate metabolism, GntR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |