Regulog GluR - Thermotogales
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Glucose utilization; Trehalose utilization |
| Effector: | Glucose |
| Phylum: | Thermotogae |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermotogales
- By TF family - ROK
- By effector - Glucose
- By pathway - Glucose utilization
- By pathway - Trehalose utilization
| Genome | Genes | Operons |
|---|---|---|
| Thermotoga maritima MSB8 | ||
| Thermotoga sp. RQ2 | 7 | 2 |
| Thermotoga neapolitana DSM 4359 | 8 | 2 |
| Thermotoga petrophila RKU-1 | 5 | 1 |
| Thermotoga naphthophila RKU-10 | 8 | 2 |
| Thermotoga lettingae TMO | ||
| Thermosipho africanus TCF52B | ||
| Thermosipho melanesiensis BI429 | ||
| Fervidobacterium nodosum Rt17-B1 | ||
| Petrotoga mobilis SJ95 | ||
| Thermotogales bacterium TBF 19.5.1 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| amyE |
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Thermotoga neapolitana DSM 4359 Site: position = -387 score = 4.82591 sequence = ATTTgATTAtAccGTcAgTTAAc Gene: CTN_0781: extracellular alpha-amylase precursor |
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Thermotoga petrophila RKU-1 Site: position = -52 score = 5.99096 sequence = ATTTGATTATAACGTCATTTAAT Gene: Tpet_0953: extracellular alpha-amylase precursor |
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Thermotoga naphthophila RKU-10 Site: position = -52 score = 5.99096 sequence = ATTTGATTATAACGTCATTTAAT Gene: Tnap_0601: extracellular alpha-amylase precursor |
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Gene: Fnod_1683: extracellular alpha-amylase precursor |
Gene: Pmob_1428: extracellular alpha-amylase precursor |
Gene: Kole_0461: extracellular alpha-amylase precursor |
extracellular alpha-amylase precursor |
| treE |
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Thermotoga sp. RQ2 Site: position = -48 score = 5.99096 sequence = ATTTGATTACAACGTCATTTAAC Gene: TRQ2_0970: Trehalose ABC transporter, substrate-binding component |
Gene: CTN_0780: Trehalose ABC transporter, substrate-binding component |
Gene: Tpet_0954: Trehalose ABC transporter, substrate-binding component |
Gene: Tnap_0600: Trehalose ABC transporter, substrate-binding component |
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Gene: THA_844: Trehalose ABC transporter, substrate-binding component |
Gene: Tmel_1820: Trehalose ABC transporter, substrate-binding component |
Gene: Fnod_0450: Trehalose ABC transporter, substrate-binding component |
Gene: Pmob_0138: Trehalose ABC transporter, substrate-binding component |
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Trehalose ABC transporter, substrate-binding component |
| treF |
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Gene: TRQ2_0971: Trehalose ABC transporter, permease component 1 |
Gene: CTN_0779: Trehalose ABC transporter, permease component 1 |
Gene: Tpet_0955: Trehalose ABC transporter, permease component 1 |
Gene: Tnap_0599: Trehalose ABC transporter, permease component 1 |
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Gene: THA_845: Trehalose ABC transporter, permease component 1 |
Gene: Tmel_1819: Trehalose ABC transporter, permease component 1 |
Gene: Fnod_0449: Trehalose ABC transporter, permease component 1 |
Gene: Pmob_0028: Trehalose ABC transporter, permease component 1 |
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Trehalose ABC transporter, permease component 1 |
| treG |
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Gene: TRQ2_0972: Trehalose ABC transporter, permease component 1 |
Gene: CTN_0778: Trehalose ABC transporter, permease component 1 |
Gene: Tpet_0956: Trehalose ABC transporter, permease component 1 |
Gene: Tnap_0598: Trehalose ABC transporter, permease component 1 |
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Gene: THA_846: Trehalose ABC transporter, permease component 1 |
Gene: Tmel_1818: Trehalose ABC transporter, permease component 1 |
Gene: Fnod_0448: Trehalose ABC transporter, permease component 1 |
Gene: Pmob_0029: Trehalose ABC transporter, permease component 1 |
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Trehalose ABC transporter, permease component 1 |
| gluR |
Gene: TM1847: Predicted regulator of glucose and trehalose utilization, ROK family |
Gene: TRQ2_0976: Predicted regulator of glucose and trehalose utilization, ROK family |
Gene: CTN_0774: Predicted regulator of glucose and trehalose utilization, ROK family |
Gene: Tpet_0957: Predicted regulator of glucose and trehalose utilization, ROK family |
Gene: Tnap_0594: Predicted regulator of glucose and trehalose utilization, ROK family |
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Predicted regulator of glucose and trehalose utilization, ROK family |
| gluE |
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*
Thermotoga sp. RQ2 Site: position = -121 score = 6.30633 sequence = ATTTAATTCCTTTGGAAATTAAT Gene: TRQ2_0973: Glucose ABC transporter, substrate-binding component |
*
Thermotoga neapolitana DSM 4359 Site: position = -121 score = 6.26143 sequence = ATTTGATTCCGTTGGAAATTAAT Gene: CTN_0777: Glucose ABC transporter, substrate-binding component |
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Thermotoga naphthophila RKU-10 Site: position = -133 score = 6.30633 sequence = ATTTAATTCCTTTGGAAATTAAT Gene: Tnap_0597: Glucose ABC transporter, substrate-binding component |
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Glucose ABC transporter, substrate-binding component |
| gluF |
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Gene: TRQ2_0974: Glucose ABC transporter, permease component |
Gene: CTN_0776: Glucose ABC transporter, permease component |
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Gene: Tnap_0596: Glucose ABC transporter, permease component |
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Glucose ABC transporter, permease component |
| gluK |
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Gene: TRQ2_0975: Glucose ABC transporter, ATP-binding component |
Gene: CTN_0775: Glucose ABC transporter, ATP-binding component |
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Gene: Tnap_0595: Glucose ABC transporter, ATP-binding component |
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Glucose ABC transporter, ATP-binding component |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |