Regulog SdhR2 - Desulfuromonadales

Member of regulog collections
- By taxonomy - Desulfuromonadales
- By TF family - GntR/Others
- By pathway - Tricarboxylic acid cycle
Genome | Genes | Operons |
---|---|---|
Geobacter uraniumreducens Rf4 | 31 | 9 |
Geobacter sulfurreducens PCA | 29 | 9 |
Geobacter metallireducens GS-15 | 31 | 9 |
Geobacter sp. FRC-32 | 27 | 9 |
Geobacter sp. M21 | 31 | 9 |
Geobacter lovleyi SZ | 32 | 9 |
Pelobacter propionicus DSM 2379 | 8 | 3 |
Pelobacter carbinolicus str. DSM 2380 | ||
Desulfuromonas acetoxidans DSM 684 | 31 | 9 |
Genes | Function | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
CRON 1. | ||||||||||
sfrB |
*
Geobacter uraniumreducens Rf4 Site: position = -101 score = 6.45592 sequence = TTGCATACTGTATACAA Gene: Gura_3640: Fe(III) reductase, beta subunit |
*
Geobacter sulfurreducens PCA Site: position = -99 score = 5.86598 sequence = GTGCATACTGTATACAC Gene: GSU0510: Fe(III) reductase, beta subunit |
*
Geobacter metallireducens GS-15 Site: position = -99 score = 6.45592 sequence = TTGCATACTGTATACAA Gene: Gmet_3023: Fe(III) reductase, beta subunit |
*
Geobacter sp. FRC-32 Site: position = -101 score = 6.45592 sequence = TTGCATACTGTATACAA Gene: Geob_1607: Fe(III) reductase, beta subunit |
*
Geobacter sp. M21 Site: position = -99 score = 5.92381 sequence = CTGGATACTGTATACAA Gene: GM21_0672: Fe(III) reductase, beta subunit |
*
Geobacter lovleyi SZ Site: position = -98 score = 5.33864 sequence = AGGCATACTGTATACAA Gene: Glov_0660: Fe(III) reductase, beta subunit |
|
Gene: Pcar_2503: Fe(III) reductase, beta subunit |
*
Desulfuromonas acetoxidans DSM 684 Site: position = -121 score = 6.16095 sequence = CTGCATACTGTATACAA Gene: Dace_2865: Fe(III) reductase, beta subunit |
Fe(III) reductase, beta subunit |
sfrA |
Gene: Gura_3639: Fe(III) reductase, alpha subunit |
Gene: GSU0509: Fe(III) reductase, alpha subunit |
Gene: Gmet_3022: Fe(III) reductase, alpha subunit |
Gene: Geob_1608: Fe(III) reductase, alpha subunit |
Gene: GM21_0673: Fe(III) reductase, alpha subunit |
Gene: Glov_0661: Fe(III) reductase, alpha subunit |
|
|
Gene: Dace_2864: Fe(III) reductase, alpha subunit |
Fe(III) reductase, alpha subunit |
CRON 2. | ||||||||||
Gura_4160 |
*
Geobacter uraniumreducens Rf4 Site: position = -133 score = 6.48424 sequence = TTGTATACAGTATACAC Gene: Gura_4160: K+ transport systems, NAD-binding component |
|
*
Geobacter metallireducens GS-15 Site: position = -135 score = 6.77921 sequence = TTGTATACAGTATACAA Gene: Gmet_0063: K+ transport systems, NAD-binding component |
*
Geobacter sp. FRC-32 Site: position = -137 score = 6.77921 sequence = TTGTATACAGTATACAA Gene: Geob_0563: K+ transport systems, NAD-binding component |
*
Geobacter sp. M21 Site: position = -120 score = 6.21878 sequence = TTGTATACAGTATCCAA Gene: GM21_3877: K+ transport systems, NAD-binding component |
*
Geobacter lovleyi SZ Site: position = -160 score = 6.16095 sequence = TTGTATACAGTATGCAC Gene: Glov_0875: K+ transport systems, NAD-binding component |
*
Pelobacter propionicus DSM 2379 Site: position = -180 score = 6.45592 sequence = TTGTATACTGTATGCAA Gene: Ppro_2971: K+ transport systems, NAD-binding component |
Gene: Pcar_3127: K+ transport systems, NAD-binding component |
*
Desulfuromonas acetoxidans DSM 684 Site: position = -108 score = 5.95214 sequence = ATGTATACTGTATACAG Gene: Dace_1459: K+ transport systems, NAD-binding component |
K+ transport systems, NAD-binding component |
Gura_4159 |
Gene: Gura_4159: Sugar phosphate isomerases/epimerases |
*
Geobacter sulfurreducens PCA Site: position = -247 score = 6.48424 sequence = TTGTATACAGTATACAG Gene: GSU3371: Sugar phosphate isomerases/epimerases |
Gene: Gmet_0064: Sugar phosphate isomerases/epimerases |
Gene: Geob_0564: Sugar phosphate isomerases/epimerases |
Gene: GM21_3876: Sugar phosphate isomerases/epimerases |
Gene: Glov_0876: Sugar phosphate isomerases/epimerases |
Gene: Ppro_2972: Sugar phosphate isomerases/epimerases |
Gene: Pcar_3128: Sugar phosphate isomerases/epimerases |
|
Sugar phosphate isomerases/epimerases |
galE |
Gene: Gura_3171: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: GSU2240: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: Gmet_2329: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: Geob_0284: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: GM21_1048: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: Glov_0877: UDP-glucose 4-epimerase (EC 5.1.3.2) |
Gene: Ppro_2973: UDP-glucose 4-epimerase (EC 5.1.3.2) |
|
|
UDP-glucose 4-epimerase (EC 5.1.3.2) |
CRON 3. | ||||||||||
sdhR2 |
*
Geobacter uraniumreducens Rf4 Site: position = -43 score = 6.48424 sequence = GTGTATACTGTATACAA Gene: Gura_4161: Transcriptional regulator of central carbohydrate metabolism, GntR family |
*
Geobacter sulfurreducens PCA Site: position = -44 score = 6.48424 sequence = CTGTATACTGTATACAA Gene: GSU3370: Transcriptional regulator of central carbohydrate metabolism, GntR family |
*
Geobacter metallireducens GS-15 Site: position = -47 score = 6.77921 sequence = TTGTATACTGTATACAA Gene: Gmet_0062: Transcriptional regulator of central carbohydrate metabolism, GntR family |
*
Geobacter sp. FRC-32 Site: position = -41 score = 6.77921 sequence = TTGTATACTGTATACAA Gene: Geob_0562: Transcriptional regulator of central carbohydrate metabolism, GntR family |
*
Geobacter sp. M21 Site: position = -43 score = 6.21878 sequence = TTGGATACTGTATACAA Gene: GM21_3878: Transcriptional regulator of central carbohydrate metabolism, GntR family |
*
Geobacter lovleyi SZ Site: position = -52 score = 6.16095 sequence = GTGCATACTGTATACAA Gene: Glov_0874: Transcriptional regulator of central carbohydrate metabolism, GntR family |
*
Pelobacter propionicus DSM 2379 Site: position = -47 score = 6.45592 sequence = TTGCATACAGTATACAA Gene: Ppro_2970: Transcriptional regulator of central carbohydrate metabolism, GntR family |
|
*
Desulfuromonas acetoxidans DSM 684 Site: position = -121 score = 5.95214 sequence = CTGTATACAGTATACAT Gene: Dace_1458: Transcriptional regulator of central carbohydrate metabolism, GntR family |
Transcriptional regulator of central carbohydrate metabolism, GntR family |
CRON 4. | ||||||||||
icd |
*
Geobacter uraniumreducens Rf4 Site: position = -230 score = 6.77921 sequence = TTGTATACTGTATACAA Gene: Gura_2194: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) |
*
Geobacter sulfurreducens PCA Site: position = -192 score = 6.77921 sequence = TTGTATACTGTATACAA Gene: GSU1465: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) |
*
Geobacter metallireducens GS-15 Site: position = -145 score = 6.16095 sequence = TTGCATACTGTATACAC Gene: Gmet_1359: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) |
*
Geobacter sp. FRC-32 Site: position = -181 score = 6.77921 sequence = TTGTATACTGTATACAA Gene: Geob_2663: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) |
*
Geobacter sp. M21 Site: position = -224 score = 6.77921 sequence = TTGTATACTGTATACAA Gene: GM21_1324: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) |
*
Geobacter lovleyi SZ Site: position = -105 score = 6.16095 sequence = TTGCATACTGTATACAC Gene: Glov_1624: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) |
|
|
Gene: Dace_0151: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) |
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) |
mdh |
Gene: Gura_2193: Malate dehydrogenase (EC 1.1.1.37) |
Gene: GSU1466: Malate dehydrogenase (EC 1.1.1.37) |
Gene: Gmet_1360: Malate dehydrogenase (EC 1.1.1.37) |
Gene: Geob_2664: Malate dehydrogenase (EC 1.1.1.37) |
Gene: GM21_1325: Malate dehydrogenase (EC 1.1.1.37) |
Gene: Glov_1625: Malate dehydrogenase (EC 1.1.1.37) |
Gene: Ppro_2327: Malate dehydrogenase (EC 1.1.1.37) |
Gene: Pcar_1037: Malate dehydrogenase (EC 1.1.1.37) |
|
Malate dehydrogenase (EC 1.1.1.37) |
Gura_2192 |
Gene: Gura_2192: 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) |
Gene: GSU1467: 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) |
Gene: Gmet_1361: 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) |
Gene: Geob_2665: 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) |
Gene: GM21_1326: 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) |
Gene: Glov_1626: 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) |
Gene: Ppro_2326: 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) |
|
|
2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) |
Gura_2191 |
Gene: Gura_2191: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
Gene: GSU1468: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
Gene: Gmet_1362: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
Gene: Geob_2666: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
Gene: GM21_1327: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
Gene: Glov_1627: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
Gene: Ppro_2325: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
Gene: Pcar_1030: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
|
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
Gura_2190 |
Gene: Gura_2190: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
Gene: GSU1469: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
Gene: Gmet_1363: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
Gene: Geob_2667: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
Gene: GM21_1328: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
Gene: Glov_1628: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
Gene: Ppro_2324: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
Gene: Pcar_1029: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
|
2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
Gura_2189 |
Gene: Gura_2189: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
Gene: GSU1470: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
Gene: Gmet_1364: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
Gene: Geob_2668: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
Gene: GM21_1329: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
Gene: Glov_1629: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
Gene: Ppro_2323: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
Gene: Pcar_1028: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
|
2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) |
CRON 5. | ||||||||||
sdhC |
*
Geobacter uraniumreducens Rf4 Site: position = -274 score = 6.19404 sequence = TAGTATACAGTATACAA Gene: Gura_3257: Succinate dehydrogenase cytochrome b558 subunit |
*
Geobacter sulfurreducens PCA Site: position = -236 score = 5.89907 sequence = TAGTATACAGTATACAG Gene: GSU1176: Succinate dehydrogenase cytochrome b558 subunit |
*
Geobacter metallireducens GS-15 Site: position = -243 score = 5.89907 sequence = TAGTATACAGTATACAG Gene: Gmet_2397: Succinate dehydrogenase cytochrome b558 subunit |
*
Geobacter sp. FRC-32 Site: position = -266 score = 5.66193 sequence = TAGTATACAGTATACAT Gene: Geob_1882: Succinate dehydrogenase cytochrome b558 subunit |
*
Geobacter sp. M21 Site: position = -290 score = 6.19404 sequence = TTGTATGCTGTATACAA Gene: GM21_0912: Succinate dehydrogenase cytochrome b558 subunit |
*
Geobacter lovleyi SZ Site: position = -243 score = 5.66193 sequence = TTGTATGCTGTATACAT Gene: Glov_2214: Succinate dehydrogenase cytochrome b558 subunit |
Gene: Ppro_2483: Succinate dehydrogenase cytochrome b558 subunit |
Gene: Pcar_0446: Succinate dehydrogenase cytochrome b558 subunit |
*
Desulfuromonas acetoxidans DSM 684 Site: position = -279 score = 5.33864 sequence = ATGCACACTGTATACAA Gene: Dace_1172: Succinate dehydrogenase cytochrome b558 subunit |
Succinate dehydrogenase cytochrome b558 subunit |
sdhA |
Gene: Gura_3256: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: GSU1177: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: Gmet_2396: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: Geob_1883: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: GM21_0913: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: Glov_2213: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: Ppro_2482: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: Pcar_0445: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Gene: Dace_1171: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) |
frdB |
Gene: Gura_3255: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: GSU1178: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: Gmet_2395: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: Geob_1884: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: GM21_0914: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: Glov_2212: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: Ppro_2481: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: Pcar_0444: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Gene: Dace_1170: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
CRON 6. | ||||||||||
gltA |
*
Geobacter uraniumreducens Rf4 Site: position = -218 score = 5.07676 sequence = TTGTATACAGTATATTT Gene: Gura_1576: Citrate synthase (si) (EC 2.3.3.1) |
*
Geobacter sulfurreducens PCA Site: position = -213 score = 6.19404 sequence = TTGTATACAGTATACTA Gene: GSU1106: Citrate synthase (si) (EC 2.3.3.1) |
*2
Geobacter metallireducens GS-15 Site: position = -215 score = 6.19404 sequence = TTGTATACAGTATACTA Gene: Gmet_2689: Citrate synthase (si) (EC 2.3.3.1) Gene: Gmet_1124: Citrate synthase (si) (EC 2.3.3.1) |
*2
Geobacter sp. FRC-32 Site: position = -214 score = 5.07676 sequence = TTGTATACAGTATATTT Gene: Geob_3549: Citrate synthase (si) (EC 2.3.3.1) Gene: Geob_0514: Citrate synthase (si) (EC 2.3.3.1) |
*2
Geobacter sp. M21 Site: position = -131 score = 5.66193 sequence = TTGTATACAGTATACCT Gene: GM21_2561: Citrate synthase (si) (EC 2.3.3.1) Gene: GM21_3990: Citrate synthase (si) (EC 2.3.3.1) |
*
Geobacter lovleyi SZ Site: position = -80 score = 5.31389 sequence = TTGTATACAGTATATTC Gene: Glov_1379: Citrate synthase (si) (EC 2.3.3.1) |
Gene: Ppro_1134: Citrate synthase (si) (EC 2.3.3.1) |
Gene: Pcar_1991: Citrate synthase (si) (EC 2.3.3.1) |
*
Desulfuromonas acetoxidans DSM 684 Site: position = -205 score = 5.63361 sequence = TAGAATACTGTATACAA Gene: Dace_0517: Citrate synthase (si) (EC 2.3.3.1) |
Citrate synthase (si) (EC 2.3.3.1) |
CRON 7. | ||||||||||
acnB |
*
Geobacter uraniumreducens Rf4 Site: position = -109 score = 5.87074 sequence = TTGTATACAGTATGCGA Gene: Gura_1939: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Geobacter sulfurreducens PCA Site: position = -96 score = 5.68668 sequence = TTGTATACAGTATCCAT Gene: GSU1660: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Geobacter metallireducens GS-15 Site: position = -94 score = 5.68668 sequence = TTGTATACAGTATCCAT Gene: Gmet_1912: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Geobacter sp. FRC-32 Site: position = -105 score = 5.87074 sequence = TTGTATACAGTATGCCA Gene: Geob_2657: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Geobacter sp. M21 Site: position = -92 score = 5.62884 sequence = CTGTATACAGTATCCAC Gene: GM21_2989: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Geobacter lovleyi SZ Site: position = -72 score = 5.89907 sequence = TTGTATACACTATACAC Gene: Glov_1887: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Ppro_1692: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Gene: Pcar_2165: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
*
Desulfuromonas acetoxidans DSM 684 Site: position = -130 score = 5.31389 sequence = TCGTATACAGTACACAG Gene: Dace_0315: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99) |
CRON 8. | ||||||||||
hemL |
*
Geobacter uraniumreducens Rf4 Site: position = -200 score = 6.19404 sequence = TCGTATACTGTATACAA Gene: Gura_4245: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
*
Geobacter sulfurreducens PCA Site: position = -221 score = 5.89907 sequence = GCGTATACTGTATACAA Gene: GSU0337: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
*
Geobacter metallireducens GS-15 Site: position = -224 score = 5.89907 sequence = GCGTATACTGTATACAA Gene: Gmet_3356: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
*
Geobacter sp. FRC-32 Site: position = -196 score = 5.89907 sequence = TAGTATACTGTATACAG Gene: Geob_0461: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
*
Geobacter sp. M21 Site: position = -261 score = 5.66193 sequence = AGGTATACTGTATACAA Gene: GM21_4011: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
*
Geobacter lovleyi SZ Site: position = -265 score = 5.66193 sequence = AGGTATACTGTATACAA Gene: Glov_3139: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: Ppro_2666: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: Pcar_0266: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Gene: Dace_3030: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
CRON 9. | ||||||||||
nuoA-1 |
*
Geobacter uraniumreducens Rf4 Site: position = -115 score = 6.19404 sequence = TTGTATACAGTATACGA Gene: Gura_4244: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Geobacter sulfurreducens PCA Site: position = -102 score = 5.89907 sequence = TTGTATACAGTATACGC Gene: GSU0338: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Geobacter metallireducens GS-15 Site: position = -111 score = 5.89907 sequence = TTGTATACAGTATACGC Gene: Gmet_3355: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Geobacter sp. FRC-32 Site: position = -114 score = 5.89907 sequence = CTGTATACAGTATACTA Gene: Geob_0462: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Geobacter sp. M21 Site: position = -145 score = 5.66193 sequence = TTGTATACAGTATACCT Gene: GM21_4010: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
*
Geobacter lovleyi SZ Site: position = -53 score = 5.66193 sequence = TTGTATACAGTATACCT Gene: Glov_3138: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
3
Pelobacter propionicus DSM 2379 Gene: Ppro_3193: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) Gene: Ppro_1623: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) Gene: Ppro_0628: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
|
*
Desulfuromonas acetoxidans DSM 684 Site: position = -131 score = 5.57577 sequence = TTGCATACAGTATACTC Gene: Dace_3231: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
nuoB |
Gene: Gura_4243: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: GSU0339: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Gmet_3354: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Geob_0463: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: GM21_4009: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
Gene: Glov_3137: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
|
|
Gene: Dace_3230: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
nuoC |
Gene: Gura_4242: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: GSU0340: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Gmet_3353: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Geob_0464: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: GM21_4008: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
Gene: Glov_3136: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
|
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Gene: Dace_3229: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
nouD |
Gene: Gura_4241: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: GSU0341: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Gmet_3352: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Geob_0465: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: GM21_4007: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
Gene: Glov_3135: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
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Gene: Dace_3228: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
nuoE-1 |
Gene: Gura_4240: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: GSU0342: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Gmet_3351: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Geob_0466: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: GM21_4006: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Glov_3134: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
Gene: Ppro_1488: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
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NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) |
nouF |
Gene: Gura_4239: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: GSU0343: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Gmet_3350: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Geob_0467: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: GM21_4005: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gene: Glov_3133: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
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NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) |
Gura_4238 |
Gene: Gura_4238: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: GSU0344: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Gmet_3349: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Geob_0468: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: GM21_4004: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
Gene: Glov_3132: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
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NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) |
nuoH-1 |
Gene: Gura_4237: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: GSU0345: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Gmet_3348: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Geob_0469: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: GM21_4003: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
Gene: Glov_3131: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
3
Pelobacter propionicus DSM 2379 Gene: Ppro_3186: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) Gene: Ppro_1630: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) Gene: Ppro_0635: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
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Gene: Dace_3227: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
nuoI-1 |
Gene: Gura_4236: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: GSU0346: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Gmet_3347: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
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Gene: GM21_4002: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
Gene: Glov_3130: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
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NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
nuoJ |
Gene: Gura_4235: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: GSU0347: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Gmet_3346: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Geob_0471: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: GM21_4001: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
Gene: Glov_3129: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
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Gene: Dace_3225: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
nuoK |
Gene: Gura_4234: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: GSU0348: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Gmet_3345: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Geob_0472: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: GM21_4000: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
Gene: Glov_3128: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
3
Pelobacter propionicus DSM 2379 Gene: Ppro_1633: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) Gene: Ppro_0638: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) Gene: Ppro_3183: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
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Gene: Dace_3224: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
nuoL-1 |
Gene: Gura_4233: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: GSU0349: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Gmet_3344: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Geob_0473: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: GM21_3999: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
Gene: Glov_3127: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
3
Pelobacter propionicus DSM 2379 Gene: Ppro_1634: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) Gene: Ppro_0639: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) Gene: Ppro_3182: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
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Gene: Dace_3223: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
nuoM-1 |
Gene: Gura_4232: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: GSU0350: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Gmet_3343: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Geob_0474: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: GM21_3998: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
Gene: Glov_3126: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
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Gene: Dace_3222: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
nuoN-2 |
2
Geobacter uraniumreducens Rf4 Gene: Gura_4231: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Gene: Gura_0313: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
2
Geobacter sulfurreducens PCA Gene: GSU3429: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Gene: GSU0351: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
2
Geobacter metallireducens GS-15 Gene: Gmet_0172: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Gene: Gmet_3342: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
2
Geobacter sp. FRC-32 Gene: Geob_1275: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Gene: Geob_0475: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
2
Geobacter sp. M21 Gene: GM21_3997: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Gene: GM21_0148: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Glov_3125: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
3
Pelobacter propionicus DSM 2379 Gene: Ppro_1636: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Gene: Ppro_0641: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) Gene: Ppro_3180: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Pcar_0216: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Gene: Dace_3221: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
Geob_0470 |
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Gene: Geob_0470: NADH-quinone oxidoreductase, chain I |
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3
Pelobacter propionicus DSM 2379 Gene: Ppro_3185: NADH-quinone oxidoreductase, chain I Gene: Ppro_1631: NADH-quinone oxidoreductase, chain I Gene: Ppro_0636: NADH-quinone oxidoreductase, chain I |
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Gene: Dace_3226: NADH-quinone oxidoreductase, chain I |
NADH-quinone oxidoreductase, chain I |
CRON 10. | ||||||||||
nuoA |
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*
Desulfuromonas acetoxidans DSM 684 Site: position = -264 score = 5.92381 sequence = TTGTATACAGTATTCAG Gene: Dace_3258: NADH-ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain A (EC 1.6.5.3) |
nuoB |
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Gene: Dace_3257: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) |
nuoC |
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Gene: Dace_3256: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) |
nuoD |
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Gene: Dace_3255: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) |
nuoH |
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Gene: Dace_3254: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) |
nuoI |
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Gene: Dace_3253: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) |
nuoJ |
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Gene: Dace_3252: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) |
nuoK |
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Gene: Dace_3251: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) |
nuoL |
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Gene: Dace_3250: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) |
CRON 11. | ||||||||||
Ppro_0472 |
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*2
Pelobacter propionicus DSM 2379 Gene: Ppro_0472: Pyruvate:ferredoxin oxidoreductase, gamma subunit (EC 1.2.7.1) Site: position = -68 score = 5.89907 sequence = CTGTATGCTGTATACAA Gene: Ppro_0322: Pyruvate:ferredoxin oxidoreductase, gamma subunit (EC 1.2.7.1) |
Gene: Pcar_1238: Pyruvate:ferredoxin oxidoreductase, gamma subunit (EC 1.2.7.1) |
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Pyruvate:ferredoxin oxidoreductase, gamma subunit (EC 1.2.7.1) |
Ppro_0323 |
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Gene: Ppro_0323: Pyruvate:ferredoxin oxidoreductase, gamma subunit (EC 1.2.7.1) / Pyruvate:ferredoxin oxidoreductase, delta subunit (EC 1.2.7.1) |
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Pyruvate:ferredoxin oxidoreductase, gamma subunit (EC 1.2.7.1) / Pyruvate:ferredoxin oxidoreductase, delta subunit (EC 1.2.7.1) |
Ppro_0324 |
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Gene: Ppro_0324: Pyruvate:ferredoxin oxidoreductase, alpha subunit (EC 1.2.7.1) |
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Pyruvate:ferredoxin oxidoreductase, alpha subunit (EC 1.2.7.1) |
Ppro_0325 |
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Gene: Ppro_0325: Pyruvate:ferredoxin oxidoreductase, beta subunit (EC 1.2.7.1) |
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Pyruvate:ferredoxin oxidoreductase, beta subunit (EC 1.2.7.1) |
CRON 12. | ||||||||||
Glov_3720 |
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Gene: Glov_3720: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
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*
Desulfuromonas acetoxidans DSM 684 Site: position = -113 score = 5.87074 sequence = TTGCATATTGTATACAA Gene: Dace_0149: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) |
Glov_3719 |
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Gene: Glov_3719: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
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Gene: Dace_0150: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |