Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SdhR2 in Geobacter sulfurreducens PCA

Properties
Regulator type: Transcription factor
TF locus tag: GSU3370
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Regulog: SdhR2 - Desulfuromonadales
Statistics of regulated genes:
- Genes 29
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 66 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -96
Score: 5.7
Sequence: TTGTATACAGTATCCAT
Locus tag: GSU1660
Name: acnB
Funciton: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)
acnB
Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)

Position: -213
Score: 6.2
Sequence: TTGTATACAGTATACTA
Locus tag: GSU1106
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
gltA
Citrate synthase (si) (EC 2.3.3.1)

Position: -236
Score: 5.9
Sequence: TAGTATACAGTATACAG
Locus tag: GSU1176
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b558 subunit
Locus tag: GSU1177
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: GSU1178
Name: frdB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sdhC
Succinate dehydrogenase cytochrome b558 subunit
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
frdB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)

Position: -99
Score: 5.9
Sequence: GTGCATACTGTATACAC
Locus tag: GSU0510
Name: sfrB
Funciton: Fe(III) reductase, beta subunit
sfrB
Fe(III) reductase, beta subunit

Position: -192
Score: 6.8
Sequence: TTGTATACTGTATACAA
Locus tag: GSU1465
Name: icd
Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Locus tag: GSU1466
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: GSU1467
Name: Gura_2192
Funciton: 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3)
Locus tag: GSU1468
Name: Gura_2191
Funciton: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
Locus tag: GSU1469
Name: Gura_2190
Funciton: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
Locus tag: GSU1470
Name: Gura_2189
Funciton: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3)
icd
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
mdh
Malate dehydrogenase (EC 1.1.1.37)
Gura_2192
2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3)
Gura_2191
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
Gura_2190
2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
Gura_2189
2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3)

Position: -102
Score: 5.9
Sequence: TTGTATACAGTATACGC
Locus tag: GSU0338
Name: nuoA-1
Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: GSU0339
Name: nuoB
Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: GSU0340
Name: nuoC
Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Locus tag: GSU0341
Name: nouD
Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Locus tag: GSU0342
Name: nuoE-1
Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Locus tag: GSU0343
Name: nouF
Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Locus tag: GSU0344
Name: Gura_4238
Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Locus tag: GSU0345
Name: nuoH-1
Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: GSU0346
Name: nuoI-1
Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: GSU0347
Name: nuoJ
Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: GSU0348
Name: nuoK
Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: GSU0349
Name: nuoL-1
Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: GSU0350
Name: nuoM-1
Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: GSU0351
Name: nuoN-2
Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
nuoA-1
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
nuoB
NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
nuoC
NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
nouD
NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
nuoE-1
NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
nouF
NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Gura_4238
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
nuoH-1
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
nuoI-1
NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
nuoJ
NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
nuoK
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
nuoL-1
NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
nuoM-1
NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
nuoN-2
NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)

Position: -44
Score: 6.5
Sequence: CTGTATACTGTATACAA
Locus tag: GSU3370
Name: sdhR2
Funciton: Transcriptional regulator of central carbohydrate metabolism, GntR family
sdhR2
Transcriptional regulator of central carbohydrate metabolism, GntR family

Position: -247
Score: 6.5
Sequence: TTGTATACAGTATACAG
Locus tag: GSU3371
Name: Gura_4159
Funciton: Sugar phosphate isomerases/epimerases
Gura_4159
Sugar phosphate isomerases/epimerases

Position: -221
Score: 5.9
Sequence: GCGTATACTGTATACAA
Locus tag: GSU0337
Name: hemL
Funciton: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
hemL
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
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