Regulon of SdhR2 in Geobacter sulfurreducens PCA

Properties
Regulator type:	Transcription factor
TF locus tag:	GSU3370
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR2 - Desulfuromonadales
Statistics of regulated genes:
- Genes	29
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 66 sites [see more]

Member of regulog collections

By taxonomy - Desulfuromonadales
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -96 Score: 5.7 Sequence: TTGTATACAGTATCCAT Locus tag: GSU1660 Name: acnB Funciton: Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)
	GSU1660	acnB	Aconitate hydratase 2 (EC 4.2.1.3) / 2-methylisocitrate dehydratase (EC 4.2.1.99)
Position: -213 Score: 6.2 Sequence: TTGTATACAGTATACTA Locus tag: GSU1106 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	GSU1106	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -236 Score: 5.9 Sequence: TAGTATACAGTATACAG Locus tag: GSU1176 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b558 subunit Locus tag: GSU1177 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: GSU1178 Name: frdB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	GSU1176	sdhC	Succinate dehydrogenase cytochrome b558 subunit
	GSU1177	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	GSU1178	frdB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Position: -99 Score: 5.9 Sequence: GTGCATACTGTATACAC Locus tag: GSU0510 Name: sfrB Funciton: Fe(III) reductase, beta subunit
	GSU0510	sfrB	Fe(III) reductase, beta subunit
Position: -192 Score: 6.8 Sequence: TTGTATACTGTATACAA Locus tag: GSU1465 Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42) Locus tag: GSU1466 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) Locus tag: GSU1467 Name: Gura_2192 Funciton: 2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3) Locus tag: GSU1468 Name: Gura_2191 Funciton: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) Locus tag: GSU1469 Name: Gura_2190 Funciton: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) Locus tag: GSU1470 Name: Gura_2189 Funciton: 2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3)
	GSU1465	icd	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
	GSU1466	mdh	Malate dehydrogenase (EC 1.1.1.37)
	GSU1467	Gura_2192	2-oxoglutarate oxidoreductase, delta subunit, putative (EC 1.2.7.3)
	GSU1468	Gura_2191	2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
	GSU1469	Gura_2190	2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
	GSU1470	Gura_2189	2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3)
Position: -102 Score: 5.9 Sequence: TTGTATACAGTATACGC Locus tag: GSU0338 Name: nuoA-1 Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) Locus tag: GSU0339 Name: nuoB Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) Locus tag: GSU0340 Name: nuoC Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) Locus tag: GSU0341 Name: nouD Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) Locus tag: GSU0342 Name: nuoE-1 Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) Locus tag: GSU0343 Name: nouF Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) Locus tag: GSU0344 Name: Gura_4238 Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) Locus tag: GSU0345 Name: nuoH-1 Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) Locus tag: GSU0346 Name: nuoI-1 Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) Locus tag: GSU0347 Name: nuoJ Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) Locus tag: GSU0348 Name: nuoK Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) Locus tag: GSU0349 Name: nuoL-1 Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) Locus tag: GSU0350 Name: nuoM-1 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) Locus tag: GSU0351 Name: nuoN-2 Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
	GSU0338	nuoA-1	NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
	GSU0339	nuoB	NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
	GSU0340	nuoC	NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
	GSU0341	nouD	NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
	GSU0342	nuoE-1	NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
	GSU0343	nouF	NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
	GSU0344	Gura_4238	NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
	GSU0345	nuoH-1	NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
	GSU0346	nuoI-1	NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
	GSU0347	nuoJ	NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
	GSU0348	nuoK	NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
	GSU0349	nuoL-1	NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
	GSU0350	nuoM-1	NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
	GSU0351	nuoN-2	NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
Position: -44 Score: 6.5 Sequence: CTGTATACTGTATACAA Locus tag: GSU3370 Name: sdhR2 Funciton: Transcriptional regulator of central carbohydrate metabolism, GntR family
	GSU3370	sdhR2	Transcriptional regulator of central carbohydrate metabolism, GntR family
Position: -247 Score: 6.5 Sequence: TTGTATACAGTATACAG Locus tag: GSU3371 Name: Gura_4159 Funciton: Sugar phosphate isomerases/epimerases
	GSU3371	Gura_4159	Sugar phosphate isomerases/epimerases
Position: -221 Score: 5.9 Sequence: GCGTATACTGTATACAA Locus tag: GSU0337 Name: hemL Funciton: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
	GSU0337	hemL	Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of SdhR2 in Geobacter sulfurreducens PCA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --